| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10070 | 6:1,206,892-1,210,446 | - | C2H6g24358 | CX6g041745 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| C1H6g21299 | 6:1,232,098-1,234,449 | - | C2H6g09752 | CX6g044687 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| C1H6g23000 | 6:1,236,154-1,241,180 | - | C2H6g08599 | CX6g044041 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| C1H6g17422 | 6:1,254,523-1,257,080 | - | C2H6g25055 | CX6g045866 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| C1H6g23540 | 6:1,260,805-1,265,679 | + | C2H6g03148 | CX6g043331 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| C1H6g19109 | 6:1,272,128-1,273,395 | - | C2H6g23474 | - | - | Os06g0320850 | - | Detail |
| C1H6g16194 | 6:1,274,268-1,275,107 | - | - | - | - | - | - | Detail |
| C1H6g09083 | 6:1,281,026-1,281,307 | - | C2H6g03555 | CX6g042298 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| C1H6g07345 | 6:1,299,546-1,300,385 | + | C2H6g05959 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C1H6g21882 | 6:1,301,814-1,305,405 | - | C2H6g30353 | CX6g044476 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| C1H6g02027 | 6:1,309,163-1,312,823 | + | C2H6g15004 | CX6g044113 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| C1H6g14754 | 6:1,313,392-1,315,091 | - | C2H6g06475 | CX6g041350 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| C1H6g07407 | 6:1,316,219-1,319,474 | - | C2H6g13486 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C1H6g30767 | 6:1,322,518-1,324,925 | - | C2H6g29611 | CX6g042141 | LOC_Os06g04330 | Os06g0134300 | - | Detail |
| C1H6g02287 | 6:1,340,470-1,345,102 | - | C2H6g16063 | CX6g042141 | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g27088 | 6:1,345,304-1,346,406 | - | C2H6g07865 | - | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g08483 | 6:1,348,819-1,352,221 | - | C2H6g27381 | CX6g042141 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| C1H6g12134 | 6:1,353,149-1,356,053 | - | C2H6g21512 | CX6g042141 | LOC_Os06g04360 | Os06g0134500 | - | Detail |
| C1H6g22115 | 6:1,358,111-1,361,335 | + | C2H6g22079 | CX6g044169 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| C1H6g09734 | 6:1,366,419-1,369,745 | - | C2H6g05948 | CX6g042673 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g10957 | 4:15,270,002-15,274,850 | - | C1H4g23526 | CX4g035973 | LOC_Os04g30430 | Os04g0372800 | - | Detail |
| C2H4g23915 | 4:15,280,849-15,281,550 | + | C1H4g19886 | - | - | - | - | Detail |
| C2H4g15991 | 4:15,282,642-15,285,663 | + | C1H4g17345 | CX4g031881 | LOC_Os04g30450 | Os04g0373000 | - | Detail |
| C2H4g25729 | 4:15,290,286-15,290,513 | + | C1H4g15354 | CX4g034490 | LOC_Os04g30460 | - | - | Detail |
| C2H4g18361 | 4:15,302,768-15,303,096 | + | C1H4g23534 | CX4g034565 | LOC_Os04g30490 | Os04g0373400 | - | Detail |
| C2H4g27653 | 4:15,303,881-15,306,581 | + | C1H4g23534 | CX4g034565 | LOC_Os04g30490 | Os04g0373400 | - | Detail |
| C2H4g16321 | 4:15,350,952-15,356,452 | + | C1H4g09226 | CX4g032818 | LOC_Os04g30610 | Os04g0375300 | - | Detail |
| C2H4g25498 | 4:15,374,314-15,378,838 | + | C1H4g09226 | CX4g032818 | LOC_Os04g30660 | Os04g0375300 | - | Detail |
| C2H4g15638 | 4:15,392,590-15,397,148 | - | C1H4g09945 | CX4g032755 | LOC_Os04g30720 | Os04g0375900 | - | Detail |
| C2H4g24509 | 4:15,402,517-15,403,963 | - | C1H4g09093 | CX4g035820 | LOC_Os02g30050 | Os04g0376000 | - | Detail |
| C2H4g23366 | 4:15,404,901-15,408,517 | - | C1H4g14613 | CX4g036314 | LOC_Os04g30740 | Os04g0376100 | - | Detail |
| C2H4g02514 | 4:15,410,891-15,411,646 | + | C1H4g11665 | CX4g033855 | LOC_Os04g30750 | - | - | Detail |
| C2H4g13161 | 4:15,411,838-15,413,283 | + | C1H4g12135 | CX4g033855 | LOC_Os04g30750 | Os04g0376200 | - | Detail |
| C2H4g28902 | 4:15,416,552-15,421,210 | - | C1H4g11616 | CX4g034926 | LOC_Os04g30760 | Os04g0376300 | OsPLS4 | Detail |
| C2H4g22640 | 4:15,426,774-15,428,288 | - | C1H4g04380 | CX4g034222 | LOC_Os04g30770 | Os04g0376400 | - | Detail |
| C2H4g16376 | 4:15,433,976-15,438,516 | - | C1H4g04365 | CX4g036230 | LOC_Os04g30780 | Os04g0376500 | - | Detail |
| C2H4g13123 | 4:15,440,432-15,442,902 | - | C1H4g01599 | CX4g033110 | LOC_Os04g30790 | Os04g0376600 | - | Detail |
| C2H4g22799 | 4:15,447,246-15,450,378 | - | C1H4g10257 | CX11g013645 | LOC_Os04g30800 | Os04g0376700 | - | Detail |
| C2H4g24581 | 4:15,467,640-15,471,482 | + | C1H4g19859 | CX4g034805 | LOC_Os04g30880 | Os04g0377600 | - | Detail |
| C2H4g01775 | 4:15,472,365-15,476,696 | - | C1H4g31829 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |