| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10070 | 6:1,206,892-1,210,446 | - | C2H6g24358 | CX6g041745 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| C1H6g21299 | 6:1,232,098-1,234,449 | - | C2H6g09752 | CX6g044687 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| C1H6g23000 | 6:1,236,154-1,241,180 | - | C2H6g08599 | CX6g044041 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| C1H6g17422 | 6:1,254,523-1,257,080 | - | C2H6g25055 | CX6g045866 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| C1H6g23540 | 6:1,260,805-1,265,679 | + | C2H6g03148 | CX6g043331 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| C1H6g19109 | 6:1,272,128-1,273,395 | - | C2H6g23474 | - | - | Os06g0320850 | - | Detail |
| C1H6g16194 | 6:1,274,268-1,275,107 | - | - | - | - | - | - | Detail |
| C1H6g09083 | 6:1,281,026-1,281,307 | - | C2H6g03555 | CX6g042298 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| C1H6g07345 | 6:1,299,546-1,300,385 | + | C2H6g05959 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C1H6g21882 | 6:1,301,814-1,305,405 | - | C2H6g30353 | CX6g044476 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| C1H6g02027 | 6:1,309,163-1,312,823 | + | C2H6g15004 | CX6g044113 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| C1H6g14754 | 6:1,313,392-1,315,091 | - | C2H6g06475 | CX6g041350 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| C1H6g07407 | 6:1,316,219-1,319,474 | - | C2H6g13486 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C1H6g30767 | 6:1,322,518-1,324,925 | - | C2H6g29611 | CX6g042141 | LOC_Os06g04330 | Os06g0134300 | - | Detail |
| C1H6g02287 | 6:1,340,470-1,345,102 | - | C2H6g16063 | CX6g042141 | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g27088 | 6:1,345,304-1,346,406 | - | C2H6g07865 | - | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g08483 | 6:1,348,819-1,352,221 | - | C2H6g27381 | CX6g042141 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| C1H6g12134 | 6:1,353,149-1,356,053 | - | C2H6g21512 | CX6g042141 | LOC_Os06g04360 | Os06g0134500 | - | Detail |
| C1H6g22115 | 6:1,358,111-1,361,335 | + | C2H6g22079 | CX6g044169 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| C1H6g09734 | 6:1,366,419-1,369,745 | - | C2H6g05948 | CX6g042673 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g30291 | 6:10,644,202-10,644,483 | + | C1H6g13807 | - | - | - | - | Detail |
| C2H6g25372 | 6:10,649,772-10,650,122 | + | - | - | - | - | - | Detail |
| C2H6g08334 | 6:10,664,768-10,665,272 | + | C1H6g28465 | - | - | Os06g0328200 | - | Detail |
| C2H6g23875 | 6:10,676,269-10,678,950 | + | C1H6g18215 | CX6g043389 | LOC_Os06g22290 | Os06g0328400 | - | Detail |
| C2H6g15314 | 6:10,692,514-10,696,265 | + | C1H6g23568 | CX6g043040 | LOC_Os06g22330 | Os06g0328800 | - | Detail |
| C2H6g28071 | 6:10,697,249-10,698,793 | - | C1H6g00062 | CX6g041178 | LOC_Os06g22340 | Os06g0328900 | - | Detail |
| C2H6g24166 | 6:10,743,479-10,743,931 | + | - | CX6g044839 | LOC_Os06g22390 | Os06g0329300 | - | Detail |
| C2H6g20672 | 6:10,789,308-10,791,236 | + | C1H6g22415 | CX6g043603 | LOC_Os06g22440 | Os06g0329900 | - | Detail |
| C2H6g18800 | 6:10,804,840-10,807,614 | - | C1H6g26812 | CX6g045518 | LOC_Os06g22460 | Os06g0330100 | Pid3 | Detail |
| C2H6g26915 | 6:10,819,112-10,820,021 | - | C1H6g15163 | CX6g041667 | LOC_Os06g22490 | Os06g0330400 | - | Detail |
| C2H6g04886 | 6:10,864,136-10,865,799 | + | C1H6g09694 | CX6g044761 | LOC_Os06g30500 | Os06g0325900 | - | Detail |
| C2H6g22788 | 6:10,874,797-10,875,789 | + | C1H6g11051 | CX6g044102 | LOC_Os06g30480 | Os06g0500300 | - | Detail |
| C2H6g30055 | 6:10,887,496-10,897,555 | + | C1H6g28721 | CX6g043386 | LOC_Os06g30460 | Os06g0499900 | - | Detail |
| C2H6g17391 | 6:10,902,779-10,906,089 | + | C1H6g12504 | CX6g045782 | LOC_Os06g30440 | Os06g0499500 | - | Detail |
| C2H6g10972 | 6:10,915,349-10,918,164 | + | C1H6g27560 | CX6g041652 | LOC_Os06g30420 | Os06g0499301 | - | Detail |
| C2H6g00827 | 6:10,932,145-10,938,966 | - | C1H6g28317 | CX6g043980 | LOC_Os06g30390 | Os06g0499000 | - | Detail |
| C2H6g00485 | 6:10,941,193-10,944,745 | - | C1H6g05561 | CX6g041677 | LOC_Os06g30380 | Os06g0498900 | - | Detail |
| C2H6g15495 | 6:10,957,008-10,958,531 | + | C1H6g00209 | CX6g043686 | LOC_Os06g30370 | Os06g0498800 | OsMFT1 | Detail |
| C2H6g17443 | 6:10,959,085-10,959,297 | + | C1H6g00209 | CX6g043686 | LOC_Os06g30370 | Os06g0498800 | OsMFT1 | Detail |
| C2H6g29118 | 6:10,990,291-10,990,857 | + | C1H6g25364 | CX6g043303 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |