| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g09591 | 6:680,903-684,090 | + | C2H6g29867 | CX6g042668 | LOC_Os06g02600 | Os06g0116600 | - | Detail |
| C1H6g24899 | 6:684,238-685,224 | - | C2H6g18696 | CX6g045479 | LOC_Os06g03740 | Os06g0128000 | - | Detail |
| C1H6g20657 | 6:685,744-690,978 | - | C2H6g00033 | CX6g042612 | LOC_Os06g02620 | Os06g0116800 | - | Detail |
| C1H6g01465 | 6:738,937-741,886 | - | C2H6g00244 | CX6g045343 | LOC_Os06g10670 | Os06g0119600 | - | Detail |
| C1H6g29859 | 6:788,405-791,383 | - | - | - | - | - | - | Detail |
| C1H6g30566 | 6:798,397-799,929 | + | C2H6g20377 | CX6g045343 | LOC_Os06g10670 | Os06g0121800 | - | Detail |
| C1H6g23901 | 6:806,964-809,333 | + | C2H6g13502 | CX6g045540 | LOC_Os06g03380 | Os06g0122200 | - | Detail |
| C1H6g23655 | 6:830,815-833,244 | + | C2H6g19065 | CX6g041830 | LOC_Os06g03380 | Os06g0124300 | - | Detail |
| C1H6g27678 | 6:836,909-837,958 | + | C2H6g16920 | - | LOC_Os06g03486 | Os06g0124900 | - | Detail |
| C1H6g05099 | 6:842,508-844,491 | - | C2H6g10660 | CX6g042775 | LOC_Os06g03500 | Os06g0125000 | - | Detail |
| C1H6g10351 | 6:845,862-848,510 | - | C2H6g10660 | CX6g042775 | LOC_Os06g03500 | Os06g0125000 | - | Detail |
| C1H6g04642 | 6:856,674-859,329 | + | C2H6g17434 | - | LOC_Os06g03486 | Os06g0124900 | - | Detail |
| C1H6g27255 | 6:862,787-863,316 | + | C2H6g04513 | CX6g045132 | LOC_Os06g03520 | Os06g0125200 | OsFLZ18 | Detail |
| C1H6g10569 | 6:864,343-865,947 | + | C2H6g27787 | CX6g044592 | LOC_Os06g03530 | Os06g0125300 | - | Detail |
| C1H6g05009 | 6:866,153-870,425 | - | C2H6g11024 | CX6g041892 | LOC_Os06g03540 | Os06g0125400 | - | Detail |
| C1H6g31112 | 6:873,009-878,020 | - | C2H6g02805 | CX6g045543 | LOC_Os06g03560 | Os06g0125500 | OsGT1, OsOPT3 | Detail |
| C1H6g22566 | 6:878,828-880,582 | + | C2H6g24048 | CX6g043617 | LOC_Os06g03570 | Os06g0125600 | - | Detail |
| C1H6g09651 | 6:885,155-886,909 | + | C2H6g27449 | CX6g043217 | LOC_Os06g03580 | Os06g0125800 | OsBBI1 | Detail |
| C1H6g07085 | 6:889,052-890,035 | - | - | - | - | - | - | Detail |
| C1H6g19209 | 6:890,886-897,571 | - | C2H6g25756 | CX6g044218 | LOC_Os06g03600 | Os06g0126000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g12888 | 5:1,454,303-1,458,741 | + | C1H5g06409 | CX5g038529 | - | Os05g0575400 | - | Detail |
| C2H5g25220 | 5:1,466,544-1,467,068 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g24745 | 5:1,471,155-1,472,263 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g23667 | 5:1,478,681-1,480,492 | - | C1H5g16799 | - | - | - | - | Detail |
| C2H5g10940 | 5:1,485,921-1,486,759 | + | C1H5g11198 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C2H5g13765 | 5:1,487,425-1,491,486 | - | C1H5g15292 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C2H5g03241 | 5:1,493,234-1,494,460 | + | C1H3g03993 | CX5g037263 | LOC_Os12g34990 | Os03g0288300 | - | Detail |
| C2H5g20349 | 5:1,498,611-1,502,634 | + | C1H5g09306 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C2H5g12419 | 5:1,520,537-1,521,252 | + | - | - | LOC_Os05g03960 | Os05g0130300 | - | Detail |
| C2H5g28718 | 5:1,521,612-1,529,770 | - | C1H5g31896 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C2H5g08536 | 5:1,536,595-1,537,004 | - | C1H5g15210 | - | - | Os05g0130500 | - | Detail |
| C2H5g08634 | 5:1,538,539-1,539,316 | + | - | - | LOC_Os05g04000 | Os05g0130600 | - | Detail |
| C2H5g17204 | 5:1,541,642-1,546,148 | - | C1H5g13927 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C2H5g23034 | 5:1,546,919-1,547,381 | + | C1H5g19982 | CX5g038388 | - | - | - | Detail |
| C2H5g10179 | 5:1,548,863-1,550,139 | + | C1H5g21167 | - | - | - | - | Detail |
| C2H5g12456 | 5:1,556,561-1,559,128 | - | C1H5g11003 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C2H5g08847 | 5:1,561,924-1,566,163 | - | C1H5g23202 | - | LOC_Os05g04070 | Os05g0131401 | - | Detail |
| C2H5g12807 | 5:1,568,750-1,571,496 | - | C1H5g00064 | CX5g041042 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| C2H5g15022 | 5:1,573,614-1,581,468 | - | C1H5g06759 | CX5g037262 | - | - | - | Detail |
| C2H5g11311 | 5:1,588,305-1,591,921 | + | C1H5g22859 | CX5g040539 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |