| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g09591 | 6:680,903-684,090 | + | C2H6g29867 | CX6g042668 | LOC_Os06g02600 | Os06g0116600 | - | Detail |
| C1H6g24899 | 6:684,238-685,224 | - | C2H6g18696 | CX6g045479 | LOC_Os06g03740 | Os06g0128000 | - | Detail |
| C1H6g20657 | 6:685,744-690,978 | - | C2H6g00033 | CX6g042612 | LOC_Os06g02620 | Os06g0116800 | - | Detail |
| C1H6g01465 | 6:738,937-741,886 | - | C2H6g00244 | CX6g045343 | LOC_Os06g10670 | Os06g0119600 | - | Detail |
| C1H6g29859 | 6:788,405-791,383 | - | - | - | - | - | - | Detail |
| C1H6g30566 | 6:798,397-799,929 | + | C2H6g20377 | CX6g045343 | LOC_Os06g10670 | Os06g0121800 | - | Detail |
| C1H6g23901 | 6:806,964-809,333 | + | C2H6g13502 | CX6g045540 | LOC_Os06g03380 | Os06g0122200 | - | Detail |
| C1H6g23655 | 6:830,815-833,244 | + | C2H6g19065 | CX6g041830 | LOC_Os06g03380 | Os06g0124300 | - | Detail |
| C1H6g27678 | 6:836,909-837,958 | + | C2H6g16920 | - | LOC_Os06g03486 | Os06g0124900 | - | Detail |
| C1H6g05099 | 6:842,508-844,491 | - | C2H6g10660 | CX6g042775 | LOC_Os06g03500 | Os06g0125000 | - | Detail |
| C1H6g10351 | 6:845,862-848,510 | - | C2H6g10660 | CX6g042775 | LOC_Os06g03500 | Os06g0125000 | - | Detail |
| C1H6g04642 | 6:856,674-859,329 | + | C2H6g17434 | - | LOC_Os06g03486 | Os06g0124900 | - | Detail |
| C1H6g27255 | 6:862,787-863,316 | + | C2H6g04513 | CX6g045132 | LOC_Os06g03520 | Os06g0125200 | OsFLZ18 | Detail |
| C1H6g10569 | 6:864,343-865,947 | + | C2H6g27787 | CX6g044592 | LOC_Os06g03530 | Os06g0125300 | - | Detail |
| C1H6g05009 | 6:866,153-870,425 | - | C2H6g11024 | CX6g041892 | LOC_Os06g03540 | Os06g0125400 | - | Detail |
| C1H6g31112 | 6:873,009-878,020 | - | C2H6g02805 | CX6g045543 | LOC_Os06g03560 | Os06g0125500 | OsGT1, OsOPT3 | Detail |
| C1H6g22566 | 6:878,828-880,582 | + | C2H6g24048 | CX6g043617 | LOC_Os06g03570 | Os06g0125600 | - | Detail |
| C1H6g09651 | 6:885,155-886,909 | + | C2H6g27449 | CX6g043217 | LOC_Os06g03580 | Os06g0125800 | OsBBI1 | Detail |
| C1H6g07085 | 6:889,052-890,035 | - | - | - | - | - | - | Detail |
| C1H6g19209 | 6:890,886-897,571 | - | C2H6g25756 | CX6g044218 | LOC_Os06g03600 | Os06g0126000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g30159 | 8:20,180,934-20,184,912 | + | C1H8g14517 | CX8g051178 | LOC_Os08g37605 | Os08g0481950 | - | Detail |
| C2H8g15130 | 8:20,185,845-20,196,202 | + | C1H8g07211 | CX8g052811 | LOC_Os08g37610 | Os08g0482100 | - | Detail |
| C2H8g13041 | 8:20,198,337-20,200,214 | - | - | - | LOC_Os08g37640 | - | - | Detail |
| C2H8g06375 | 8:20,198,476-20,198,913 | + | - | CX8g054531 | LOC_Os08g37630 | Os08g0482300 | - | Detail |
| C2H8g27335 | 8:20,201,112-20,201,683 | - | C1H8g13674 | CX8g051502 | LOC_Os08g37650 | Os08g0482500 | - | Detail |
| C2H8g01786 | 8:20,204,234-20,204,901 | - | C1H8g22517 | CX8g054566 | LOC_Os08g37660 | Os08g0482600 | - | Detail |
| C2H8g26304 | 8:20,209,551-20,210,954 | - | C1H8g26612 | CX8g051771 | LOC_Os08g37670 | Os08g0482700 | - | Detail |
| C2H8g12612 | 8:20,222,740-20,223,522 | - | C1H8g19088 | CX8g054519 | LOC_Os08g37690 | Os08g0483100 | - | Detail |
| C2H8g09038 | 8:20,223,756-20,229,073 | - | C1H8g21916 | CX8g052700 | LOC_Os08g37700 | Os08g0483200 | - | Detail |
| C2H8g27109 | 8:20,232,352-20,234,795 | - | C1H8g05510 | CX8g050983 | LOC_Os08g37720 | Os08g0483600 | - | Detail |
| C2H8g23437 | 8:20,242,436-20,244,265 | - | C1H8g11574 | CX8g053834 | LOC_Os08g37730 | Os08g0483900 | - | Detail |
| C2H8g13774 | 8:20,254,722-20,255,276 | + | C1H8g09476 | CX8g054153 | LOC_Os08g37750 | Os08g0484100 | - | Detail |
| C2H8g25738 | 8:20,256,457-20,258,479 | + | C1H8g15896 | CX8g054153 | LOC_Os08g37750 | - | - | Detail |
| C2H8g13904 | 8:20,262,259-20,263,515 | + | C1H8g09056 | CX8g053214 | LOC_Os08g37760 | Os08g0484200 | - | Detail |
| C2H8g15402 | 8:20,265,035-20,265,346 | - | C1H3g15090 | CX3g028977 | LOC_Os03g51510 | Os08g0484301 | OsRpl6-2 | Detail |
| C2H8g07782 | 8:20,268,617-20,275,829 | - | C1H8g11144 | CX8g052694 | LOC_Os08g37780 | Os08g0484400 | - | Detail |
| C2H8g28642 | 8:20,276,764-20,280,012 | - | C1H8g28521 | CX8g050930 | LOC_Os08g37790 | Os08g0484500 | - | Detail |
| C2H8g02027 | 8:20,282,838-20,283,137 | - | - | CX8g054447 | - | - | - | Detail |
| C2H8g04029 | 8:20,282,856-20,287,955 | + | C1H8g08760 | CX8g053838 | LOC_Os08g37800 | Os08g0484600 | OSK4, osk4, OsATG1c, ATG1C, SnRK1B, snrk1b, SnRK1B/OSK24, OSK24, OsK4 | Detail |
| C2H8g23842 | 8:20,290,737-20,291,705 | + | - | - | LOC_Os08g37810 | Os08g0484700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |