| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g28749 | 6:566,500-567,424 | - | C2H6g14494 | CX6g041870 | - | Os06g0113950 | - | Detail |
| C1H6g15360 | 6:569,524-574,958 | - | C2H6g24715 | CX6g041314 | LOC_Os06g02380 | Os06g0114000 | - | Detail |
| C1H6g25492 | 6:577,865-578,846 | + | C2H6g30558 | CX6g044231 | LOC_Os06g02390 | Os06g0114200 | - | Detail |
| C1H6g24136 | 6:588,323-589,376 | - | C2H6g18175 | CX6g043867 | LOC_Os06g02410 | Os06g0114400 | - | Detail |
| C1H6g10030 | 6:591,527-591,884 | - | C2H6g08822 | CX6g043304 | LOC_Os06g02420 | Os06g0114500 | - | Detail |
| C1H6g00492 | 6:594,141-597,722 | + | C2H6g11904 | CX6g041821 | LOC_Os06g02430 | Os06g0114600 | - | Detail |
| C1H6g12736 | 6:598,331-599,826 | + | C2H6g02992 | CX6g042964 | - | Os06g0114650 | - | Detail |
| C1H6g02905 | 6:599,914-602,784 | - | C2H6g19943 | CX6g041642 | LOC_Os06g02440 | Os06g0114700 | - | Detail |
| C1H6g21455 | 6:609,612-611,727 | + | C2H6g28820 | CX6g041678 | LOC_Os06g02470 | Os06g0115100 | - | Detail |
| C1H6g08435 | 6:618,073-618,998 | - | C2H6g24491 | - | LOC_Os06g02490 | Os06g0115300 | OsACBP2 | Detail |
| C1H6g28760 | 6:623,068-625,728 | - | C2H6g27107 | CX6g041813 | LOC_Os06g02500 | Os06g0115400 | - | Detail |
| C1H6g13559 | 6:626,508-628,111 | - | C2H6g11330 | CX6g044551 | LOC_Os06g02510 | Os06g0115500 | - | Detail |
| C1H6g05893 | 6:630,603-633,765 | + | C2H6g06508 | CX6g042923 | LOC_Os06g02520 | Os06g0115600 | IPD3, OsIPD3, Osipd3, CYCLOPS, IPD3/CYCLOPS, OsCYCLOPS | Detail |
| C1H6g13072 | 6:634,390-635,109 | - | C2H6g04821 | CX6g044608 | LOC_Os06g02530 | Os06g0115700 | - | Detail |
| C1H6g29518 | 6:635,771-639,347 | - | C2H6g10122 | CX6g042491 | LOC_Os06g02540 | Os06g0115800 | - | Detail |
| C1H6g27877 | 6:643,398-650,359 | + | - | CX6g041523 | - | Os06g0116100 | - | Detail |
| C1H6g15739 | 6:651,277-654,053 | - | C2H6g13300 | CX6g044989 | LOC_Os06g02560 | Os06g0116200 | OsGRF5 | Detail |
| C1H6g24770 | 6:660,065-664,139 | - | C2H6g03741 | CX6g041960 | LOC_Os06g02570 | Os06g0116300 | - | Detail |
| C1H6g02215 | 6:665,660-667,357 | - | C2H6g03499 | CX6g042572 | LOC_Os06g02580 | Os06g0116400 | - | Detail |
| C1H6g17710 | 6:672,058-680,360 | + | C2H6g25856 | CX6g044871 | LOC_Os06g02590 | Os06g0116500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g11033 | 4:23,665,088-23,667,430 | - | C1H4g12131 | CX4g032840 | LOC_Os04g46320 | Os04g0548400 | - | Detail |
| C2H4g30491 | 4:23,670,654-23,671,898 | - | C1H2g19219 | CX4g032635 | LOC_Os04g46330 | Os04g0548500 | - | Detail |
| C2H4g19703 | 4:23,678,990-23,680,201 | - | C1H4g26382 | CX4g034670 | LOC_Os04g46350 | Os04g0548700 | - | Detail |
| C2H4g12477 | 4:23,690,645-23,694,074 | - | C1H4g18543 | CX4g032819 | LOC_Os04g46370 | Os04g0549300 | - | Detail |
| C2H4g23802 | 4:23,694,280-23,694,680 | + | C1H4g06939 | CX4g034583 | LOC_Os04g46380 | Os04g0549400 | - | Detail |
| C2H4g16012 | 4:23,698,059-23,699,921 | + | C1H4g13580 | CX4g033131 | LOC_Os04g46384 | Os04g0549500 | Os2R_MYB49 | Detail |
| C2H4g10744 | 4:23,700,634-23,705,138 | + | C1H4g09321 | CX4g031909 | LOC_Os04g46390 | Os04g0549600 | - | Detail |
| C2H4g11718 | 4:23,711,947-23,712,801 | + | C1H4g06177 | CX4g032343 | LOC_Os04g46400 | Os04g0549700 | OsAP2/ERF-40, OsTOC168 | Detail |
| C2H4g26941 | 4:23,717,907-23,718,638 | + | C1H4g06177 | CX4g034152 | LOC_Os04g46410 | Os04g0549800 | - | Detail |
| C2H4g00089 | 4:23,737,285-23,737,938 | + | C1H4g06177 | CX4g032904 | LOC_Os04g46440 | Os04g0550200 | OsERF34 | Detail |
| C2H4g18020 | 4:23,737,952-23,738,382 | - | C1H4g25073 | - | - | - | - | Detail |
| C2H4g27792 | 4:23,748,870-23,757,468 | - | C1H4g24190 | CX4g034813 | LOC_Os04g46450 | Os04g0550400 | OsHUB1, HUB1 | Detail |
| C2H4g02409 | 4:23,760,525-23,761,556 | + | - | CX4g032195 | LOC_Os04g46460 | Os04g0550500 | - | Detail |
| C2H4g04395 | 4:23,765,337-23,767,978 | + | C1H4g17634 | CX4g034240 | LOC_Os04g46470 | Os04g0550600 | HTD1, OsCCD7, D17 | Detail |
| C2H4g05787 | 4:23,768,309-23,770,201 | - | C1H4g11880 | CX4g034920 | LOC_Os04g46480 | Os04g0550700 | - | Detail |
| C2H4g01885 | 4:23,773,303-23,774,294 | - | C1H4g31862 | CX4g034128 | LOC_Os04g46490 | Os04g0550800 | - | Detail |
| C2H4g17694 | 4:23,774,764-23,775,695 | - | C1H4g15457 | CX4g034482 | LOC_Os04g46530 | Os04g0550900 | - | Detail |
| C2H4g01769 | 4:23,780,337-23,783,129 | + | C1H4g10662 | CX4g034419 | LOC_Os04g46560 | Os04g0551200 | OsMDH4.1 | Detail |
| C2H4g03635 | 4:23,784,093-23,787,452 | - | C1H4g21894 | CX4g035452 | LOC_Os04g46570 | Os04g0551300 | - | Detail |
| C2H4g26920 | 4:23,790,158-23,793,292 | + | C1H4g10694 | CX4g033814 | LOC_Os04g46580 | Os04g0551500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |