| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07341 | 1:24,288,134-24,288,895 | + | C2H1g27855 | CX1g002938 | LOC_Os01g47700 | Os01g0270300 | - | Detail |
| C1H1g20515 | 1:24,289,967-24,291,594 | + | C2H1g27855 | CX1g002938 | LOC_Os01g57730 | Os01g0962700 | - | Detail |
| C1H1g07732 | 1:24,298,089-24,301,936 | - | C2H1g30150 | CX1g001501 | LOC_Os01g47710 | Os01g0667400 | DWT1, OsWOX7, Os WOX7, WOX7, OsWOX9A | Detail |
| C1H1g06325 | 1:24,316,640-24,317,708 | + | C2H1g17608 | CX1g007033 | LOC_Os01g47730 | Os01g0667600 | - | Detail |
| C1H1g06521 | 1:24,318,201-24,327,171 | - | C2H1g29615 | CX1g001948 | LOC_Os01g47740 | Os01g0667700 | - | Detail |
| C1H1g13825 | 1:24,373,250-24,374,997 | + | C2H1g11333 | CX1g002850 | LOC_Os01g47770 | Os01g0668000 | - | Detail |
| C1H1g02552 | 1:24,384,296-24,393,541 | + | C2H1g26438 | CX1g000496 | LOC_Os01g47800 | Os01g0668300 | - | Detail |
| C1H1g13739 | 1:24,402,633-24,405,026 | - | C2H1g02543 | CX1g003920 | LOC_Os01g47820 | Os01g0668600 | SDRLK-12 | Detail |
| C1H1g06889 | 1:24,411,671-24,416,272 | - | - | - | - | - | - | Detail |
| C1H1g14765 | 1:24,418,158-24,420,653 | - | C2H1g04620 | CX1g003920 | LOC_Os01g47900 | Os01g0669100 | - | Detail |
| C1H1g01688 | 1:24,432,401-24,434,845 | - | C2H1g07553 | CX1g003920 | LOC_Os01g48000 | Os01g0670100 | SDRLK-13 | Detail |
| C1H1g12093 | 1:24,451,632-24,454,207 | - | C2H1g01164 | CX1g003920 | LOC_Os01g48040 | Os01g0670600 | SDRLK-14 | Detail |
| C1H1g22206 | 1:24,456,167-24,463,561 | - | C2H1g04896 | CX1g006814 | LOC_Os01g48060 | Os01g0670800 | OsARF2, OsETT2, ARF3a | Detail |
| C1H1g00357 | 1:24,493,856-24,494,345 | - | C2H1g18055 | CX1g006626 | LOC_Os01g48130 | Os01g0672100 | - | Detail |
| C1H1g22608 | 1:24,512,593-24,528,862 | + | C2H1g23590 | CX1g005190 | LOC_Os01g48170 | Os01g0672201 | - | Detail |
| C1H1g30509 | 1:24,531,806-24,535,371 | + | C2H1g10699 | CX1g001676 | LOC_Os01g48190 | Os01g0672400 | - | Detail |
| C1H1g25440 | 1:24,556,064-24,558,073 | - | C2H3g22127 | CX1g002153 | LOC_Os01g37580 | Os01g0846000 | - | Detail |
| C1H1g25004 | 1:24,570,925-24,576,681 | + | C2H1g08595 | CX1g000126 | LOC_Os01g48210 | Os01g0672700 | - | Detail |
| C1H1g22345 | 1:24,577,392-24,580,131 | - | C2H1g25350 | CX1g006595 | LOC_Os01g48220 | Os01g0672800 | - | Detail |
| C1H1g22730 | 1:24,605,768-24,612,373 | - | C2H1g23016 | CX1g004722 | LOC_Os01g48270 | Os01g0673500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03290 | 3:12,842,350-12,842,710 | - | - | - | - | - | - | Detail |
| C2H3g10191 | 3:12,850,682-12,854,416 | + | C1H3g05126 | CX3g029883 | LOC_Os03g25400 | Os03g0370000 | - | Detail |
| C2H3g30681 | 3:12,856,860-12,861,072 | + | C1H7g09543 | CX3g025282 | LOC_Os03g25420 | Os03g0370200 | - | Detail |
| C2H3g01146 | 3:12,873,841-12,875,804 | - | C1H3g27086 | CX3g026690 | LOC_Os03g25460 | Os03g0370600 | - | Detail |
| C2H3g30283 | 3:12,879,327-12,879,884 | + | - | - | LOC_Os03g25470 | Os03g0370800 | - | Detail |
| C2H3g00547 | 3:12,880,237-12,883,385 | + | C1H3g23354 | CX3g031102 | LOC_Os03g25480 | Os03g0370900 | - | Detail |
| C2H3g19651 | 3:12,886,574-12,888,839 | + | C1H3g05051 | CX3g027113 | LOC_Os03g25490 | Os03g0371000 | - | Detail |
| C2H3g04381 | 3:12,895,170-12,900,255 | + | C1H3g00840 | CX3g027113 | LOC_Os03g25500 | Os03g0371300 | - | Detail |
| C2H3g15015 | 3:12,900,679-12,901,104 | + | C1H3g21806 | CX3g031102 | LOC_Os03g25490 | Os03g0370900 | - | Detail |
| C2H3g00617 | 3:12,916,267-12,917,663 | - | C1H3g16595 | CX3g030534 | LOC_Os03g25550 | Os03g0371800 | - | Detail |
| C2H3g13066 | 3:12,950,028-12,958,451 | + | C1H3g09237 | CX3g030141 | LOC_Os03g25600 | Os03g0821300 | - | Detail |
| C2H3g24461 | 3:12,960,944-12,961,547 | - | C1H3g20988 | CX3g030815 | LOC_Os03g25610 | Os03g0372600 | - | Detail |
| C2H3g09558 | 3:12,963,888-12,967,217 | + | C1H3g26671 | CX3g025086 | LOC_Os03g25620 | Os03g0372700 | - | Detail |
| C2H3g30423 | 3:12,991,252-12,995,111 | - | C1H3g02459 | CX3g029031 | LOC_Os03g25720 | Os03g0374100 | - | Detail |
| C2H3g09363 | 3:12,999,642-13,003,631 | + | C1H3g03430 | CX3g025872 | LOC_Os03g25750 | Os03g0374400 | - | Detail |
| C2H3g02420 | 3:13,004,759-13,007,289 | - | C1H3g29992 | CX3g031135 | LOC_Os03g25760 | Os03g0374500 | OsIQM3 | Detail |
| C2H3g06785 | 3:13,017,921-13,019,872 | - | C1H3g04281 | CX3g028239 | LOC_Os03g25770 | Os03g0374575 | OsSCL26 | Detail |
| C2H3g13807 | 3:13,024,500-13,029,718 | + | C1H3g12991 | CX3g025908 | LOC_Os03g25790 | Os03g0374600 | - | Detail |
| C2H3g07823 | 3:13,036,024-13,036,503 | - | C1H3g11329 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C2H3g01665 | 3:13,043,224-13,043,499 | + | - | - | LOC_Os03g25830 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |