| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17721 | 5:24,162,309-24,165,726 | - | C2H5g08893 | CX5g037640 | LOC_Os05g51420 | Os08g0398400 | OsHIR1, OsHSI1 | Detail |
| C1H5g09746 | 5:24,168,834-24,169,897 | + | C2H5g12015 | - | LOC_Os05g51440 | Os05g0592000 | - | Detail |
| C1H5g13463 | 5:24,170,131-24,173,578 | - | C2H5g20454 | CX5g037130 | LOC_Os05g51450 | Os05g0592100 | AL3, OsClpR1 | Detail |
| C1H5g18064 | 5:24,179,127-24,181,265 | + | C2H5g22532 | CX5g037674 | LOC_Os05g51470 | Os05g0592300 | - | Detail |
| C1H5g29997 | 5:24,183,995-24,184,294 | - | C2H5g07753 | - | LOC_Os04g46270 | - | - | Detail |
| C1H5g01451 | 5:24,184,448-24,184,892 | - | C2H5g11116 | CX5g040049 | - | Os04g0547800 | - | Detail |
| C1H5g21435 | 5:24,185,320-24,200,810 | + | C2H5g07712 | CX5g039347 | LOC_Os05g51480 | Os05g0592400 | - | Detail |
| C1H5g00098 | 5:24,202,938-24,208,839 | - | C2H5g25797 | CX5g041136 | LOC_Os05g51500 | Os05g0592600 | - | Detail |
| C1H5g06239 | 5:24,210,272-24,213,792 | - | C2H5g18379 | CX5g038095 | LOC_Os05g51510 | Os05g0592800 | - | Detail |
| C1H5g06040 | 5:24,217,329-24,223,625 | - | C2H5g13073 | CX5g040640 | LOC_Os05g51520 | Os05g0593000 | - | Detail |
| C1H5g29585 | 5:24,224,922-24,226,117 | - | C2H5g03858 | CX5g039758 | LOC_Os05g51540 | Os05g0593200 | - | Detail |
| C1H5g12721 | 5:24,227,927-24,238,894 | - | C2H5g22607 | CX5g036829 | LOC_Os05g51550 | Os05g0593550 | - | Detail |
| C1H5g11475 | 5:24,240,257-24,240,706 | - | C2H5g18281 | - | - | - | - | Detail |
| C1H5g20997 | 5:24,241,554-24,246,418 | - | C2H5g29211 | CX5g038490 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| C1H5g28104 | 5:24,249,627-24,251,054 | - | C2H5g25800 | CX5g040981 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| C1H5g28669 | 5:24,259,780-24,260,625 | - | C2H5g28633 | CX5g037849 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| C1H5g07980 | 5:24,262,701-24,266,582 | - | C2H5g27012 | CX5g040080 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| C1H5g15566 | 5:24,269,560-24,275,165 | - | C2H5g24138 | CX5g038359 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| C1H5g26110 | 5:24,284,106-24,291,948 | + | C2H5g08909 | CX5g041049 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| C1H5g09316 | 5:24,293,145-24,297,780 | - | C2H5g25499 | CX5g039720 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g01496 | 10:12,354,837-12,361,303 | - | C1H10g25661 | CX10g009967 | LOC_Os10g26060 | Os10g0400200 | OsGluA2 | Detail |
| C2H10g30625 | 10:12,377,978-12,379,465 | - | C1H10g05076 | CX10g010708 | LOC_Os10g26110 | Os10g0400500 | - | Detail |
| C2H10g05646 | 10:12,389,767-12,394,943 | - | C1H10g09798 | CX10g009792 | LOC_Os10g26130 | Os10g0400800 | - | Detail |
| C2H10g14652 | 10:12,395,645-12,405,886 | + | C1H10g17747 | CX10g007582 | LOC_Os10g26140 | Os10g0400900 | - | Detail |
| C2H10g27373 | 10:12,406,860-12,407,105 | - | - | CX10g009486 | LOC_Os10g26150 | Os10g0401000 | - | Detail |
| C2H10g03850 | 10:12,412,016-12,416,410 | + | C1H10g07798 | CX10g008323 | LOC_Os10g26164 | Os10g0401100 | - | Detail |
| C2H10g09742 | 10:12,419,983-12,425,509 | - | C1H10g12994 | CX10g010682 | LOC_Os10g26280 | Os10g0402200 | ORC3, OsORC3 | Detail |
| C2H10g26563 | 10:12,432,730-12,434,691 | - | C1H10g19566 | CX10g007841 | LOC_Os10g26290 | Os10g0402400 | - | Detail |
| C2H10g21713 | 10:12,478,202-12,479,946 | - | C1H10g09520 | CX10g007319 | LOC_Os10g26340 | Os10g0403000 | PLA1, pla1, plt1, CYP78A11 | Detail |
| C2H10g29616 | 10:12,501,678-12,506,313 | + | C1H10g29036 | CX10g008675 | LOC_Os10g26390 | Os10g0403700 | - | Detail |
| C2H10g19378 | 10:12,515,899-12,516,262 | - | C1H10g23860 | CX10g010536 | LOC_Os10g26410 | Os10g0403800 | OsbHLH174 | Detail |
| C2H10g14621 | 10:12,542,333-12,546,565 | + | C1H10g20492 | CX10g008425 | LOC_Os10g26430 | Os09g0408300 | - | Detail |
| C2H10g15527 | 10:12,558,884-12,559,261 | + | C1H10g22107 | CX10g010293 | LOC_Os10g26460 | Os10g0404300 | OsbHLH173 | Detail |
| C2H10g02076 | 10:12,564,180-12,576,238 | + | C1H10g29328 | CX10g007588 | LOC_Os10g26470 | Os10g0404500 | OsSUT3 | Detail |
| C2H10g30475 | 10:12,577,110-12,577,733 | + | C1H10g31230 | - | LOC_Os10g26480 | - | - | Detail |
| C2H10g25009 | 10:12,588,609-12,590,444 | + | C1H10g19702 | CX10g009122 | LOC_Os10g26500 | Os10g0404900 | - | Detail |
| C2H10g00267 | 10:12,606,286-12,611,983 | + | C1H10g31687 | CX10g009203 | LOC_Os10g26520 | Os10g0405100 | - | Detail |
| C2H10g29752 | 10:12,614,280-12,616,713 | + | C1H10g29879 | CX10g010584 | LOC_Os10g26540 | Os10g0405300 | - | Detail |
| C2H10g24843 | 10:12,624,076-12,629,487 | + | C1H10g05975 | CX10g009344 | LOC_Os10g26560 | Os10g0405500 | PAIR3 | Detail |
| C2H10g12168 | 10:12,629,911-12,634,472 | - | C1H10g05197 | CX10g007362 | LOC_Os10g26570 | Os10g0405600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |