| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g05102 | 5:23,899,181-23,901,054 | + | C2H5g08711 | CX5g039086 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| C1H5g03901 | 5:23,907,339-23,909,665 | + | C2H5g19125 | CX5g036814 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| C1H5g16468 | 5:23,910,275-23,914,399 | - | C2H5g30392 | CX5g039624 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| C1H5g19912 | 5:23,916,451-23,917,138 | + | C2H5g27655 | - | LOC_Os05g50815 | Os05g0580900 | - | Detail |
| C1H5g12424 | 5:23,919,755-23,922,342 | - | C2H5g10246 | CX5g039076 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| C1H5g08867 | 5:23,925,086-23,927,161 | + | C2H5g21671 | CX5g037322 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| C1H5g02224 | 5:23,927,320-23,932,019 | - | C2H5g07511 | CX5g039391 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| C1H5g05725 | 5:23,955,193-23,960,476 | + | C2H5g12537 | CX5g037391 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| C1H5g23433 | 5:23,963,202-23,965,330 | - | C2H5g22033 | CX5g040329 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| C1H5g03676 | 5:23,967,831-23,973,608 | + | C2H5g28495 | CX5g037684 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| C1H5g31726 | 5:23,975,293-23,977,983 | + | C2H5g17335 | CX5g037746 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| C1H5g23972 | 5:23,978,930-23,983,305 | + | C2H5g13829 | CX5g037636 | LOC_Os05g50930 | Os05g0586700 | - | Detail |
| C1H5g28475 | 5:23,985,140-23,987,650 | + | C2H5g11484 | CX5g039824 | LOC_Os05g50950 | Os05g0586900 | - | Detail |
| C1H5g12900 | 5:23,988,579-23,990,873 | - | C2H5g29430 | CX5g038144 | LOC_Os05g50960 | Os05g0587000 | - | Detail |
| C1H5g28542 | 5:23,992,790-23,997,284 | - | C2H5g22520 | CX5g038565 | LOC_Os05g50970 | Os05g0587100 | - | Detail |
| C1H5g23902 | 5:24,000,126-24,004,336 | + | C2H5g13453 | CX5g038972 | LOC_Os05g50980 | Os05g0587200 | - | Detail |
| C1H5g05422 | 5:24,006,127-24,010,276 | - | C2H5g04498 | CX5g038828 | LOC_Os05g50990 | Os05g0587300 | - | Detail |
| C1H5g00207 | 5:24,019,486-24,021,971 | - | C2H5g26610 | CX5g039424 | LOC_Os05g51000 | Os05g0587400 | - | Detail |
| C1H5g22939 | 5:24,026,266-24,028,441 | - | C2H5g23551 | CX5g038264 | LOC_Os05g51020 | Os05g0587700 | - | Detail |
| C1H5g10111 | 5:24,036,513-24,039,279 | - | C2H5g16401 | CX5g040862 | LOC_Os05g51050 | Os05g0588100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g02505 | 5:24,910,003-24,911,157 | + | C1H5g05425 | CX5g038377 | LOC_Os05g51780 | Os05g0596500 | - | Detail |
| C2H5g19295 | 5:24,920,834-24,933,500 | - | C1H5g04142 | CX5g038266 | LOC_Os05g51790 | Os05g0596600 | OsSMC5 | Detail |
| C2H5g24076 | 5:24,934,794-24,938,797 | + | C1H5g09886 | CX5g040422 | LOC_Os05g51800 | Os05g0596700 | - | Detail |
| C2H5g17322 | 5:24,940,330-24,941,151 | + | C1H5g06124 | CX5g039358 | LOC_Os05g51820 | Os05g0597000 | OsMUTE | Detail |
| C2H5g24478 | 5:24,944,073-24,946,782 | - | C1H5g15760 | CX5g038345 | LOC_Os05g51830 | Os05g0597100 | HDT1, OsHDT1, HDT701 | Detail |
| C2H5g14678 | 5:24,949,981-24,951,725 | - | C1H5g16210 | CX5g038501 | LOC_Os05g51850 | Os05g0597200 | - | Detail |
| C2H5g20513 | 5:24,953,524-24,955,402 | + | C1H5g10848 | CX5g040358 | LOC_Os05g51860 | Os05g0597400 | - | Detail |
| C2H5g12335 | 5:24,984,021-24,984,275 | - | C1H5g07885 | CX5g039366 | LOC_Os05g51900 | Os05g0597700 | - | Detail |
| C2H5g02897 | 5:24,989,357-24,990,070 | - | - | CX5g038387 | LOC_Os05g51910 | - | - | Detail |
| C2H6g15066 | 6:25,220-32,389 | + | C1H6g09491 | CX6g041728 | LOC_Os06g01170 | Os06g0101000 | - | Detail |
| C2H6g27611 | 6:32,663-33,909 | + | C1H6g01140 | CX6g043815 | LOC_Os06g01180 | Os06g0101100 | - | Detail |
| C2H6g21763 | 6:35,048-39,153 | + | C1H6g30354 | CX6g043521 | LOC_Os06g01200 | Os06g0101300 | - | Detail |
| C2H6g25304 | 6:41,741-42,205 | - | - | CX6g041212 | LOC_Os06g01210 | Os06g0101600 | - | Detail |
| C2H6g26820 | 6:45,415-48,715 | - | C1H6g19084 | CX6g043577 | LOC_Os06g01230 | Os06g0101800 | - | Detail |
| C2H6g12725 | 6:58,290-60,110 | + | C1H6g05224 | CX6g041974 | LOC_Os06g01250 | Os06g0102100 | CYP93G2, CYP93G2, OsF2H | Detail |
| C2H6g26997 | 6:64,367-71,226 | + | C1H6g19151 | CX6g043096 | LOC_Os06g01260 | Os06g0102300 | OsPCS2b | Detail |
| C2H6g10493 | 6:75,375-80,723 | + | C1H6g24286 | CX6g044447 | - | - | - | Detail |
| C2H6g24439 | 6:75,653-76,368 | - | - | - | - | Os06g0102725 | - | Detail |
| C2H6g13542 | 6:84,540-98,083 | + | C1H6g17464 | CX6g044988 | LOC_Os06g01320 | Os06g0102900 | - | Detail |
| C2H6g17760 | 6:104,677-106,068 | + | C1H6g31492 | CX6g045484 | LOC_Os06g01350 | Os06g0103200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |