| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02099 | 5:23,753,581-23,755,068 | - | C2H5g13600 | CX5g040560 | LOC_Os05g50490 | Os05g0581900 | - | Detail |
| C1H5g24313 | 5:23,760,479-23,761,372 | - | C2H5g26948 | CX5g037615 | LOC_Os05g50500 | Os05g0582000 | - | Detail |
| C1H5g00717 | 5:23,762,753-23,768,398 | - | C2H5g11127 | CX5g037117 | LOC_Os05g50510 | Os05g0582100 | - | Detail |
| C1H5g14623 | 5:23,773,247-23,776,728 | + | C2H5g24114 | CX5g040852 | LOC_Os05g50550 | Os05g0582300 | OsSPS2 | Detail |
| C1H5g08047 | 5:23,778,424-23,784,583 | + | C2H5g18684 | CX5g037924 | LOC_Os05g50560 | Os05g0143500 | - | Detail |
| C1H5g30800 | 5:23,784,820-23,786,142 | + | C2H5g28002 | CX5g036920 | LOC_Os05g50570 | Os05g0582500 | - | Detail |
| C1H5g18687 | 5:23,788,907-23,790,262 | + | C2H5g18541 | CX5g038472 | LOC_Os05g50580 | Os05g0582600 | - | Detail |
| C1H5g25143 | 5:23,792,396-23,793,724 | + | C2H5g00525 | CX5g036839 | LOC_Os05g50600 | Os05g0582800 | - | Detail |
| C1H5g31178 | 5:23,798,124-23,800,031 | - | C2H5g09834 | CX5g039759 | LOC_Os05g50610 | Os05g0583000 | - | Detail |
| C1H5g13626 | 5:23,808,125-23,810,293 | + | C2H5g27671 | CX5g039128 | LOC_Os05g50624 | Os05g0583100 | - | Detail |
| C1H5g29188 | 5:23,810,721-23,818,474 | + | C2H5g14974 | CX5g037059 | LOC_Os05g50640 | Os05g0583200 | - | Detail |
| C1H5g12832 | 5:23,819,722-23,819,982 | + | C2H5g15690 | CX5g038734 | LOC_Os05g50654 | Os05g0583400 | - | Detail |
| C1H5g11375 | 5:23,822,915-23,830,788 | + | C2H5g21298 | CX5g040394 | LOC_Os05g50660 | Os05g0583500 | - | Detail |
| C1H5g12339 | 5:23,836,206-23,837,159 | + | C2H5g22702 | CX5g040044 | LOC_Os05g44090 | Os05g0583600 | - | Detail |
| C1H5g13782 | 5:23,840,417-23,841,649 | - | C2H5g01078 | CX5g040015 | LOC_Os05g50690 | Os05g0583950 | - | Detail |
| C1H5g25754 | 5:23,844,060-23,845,215 | + | C2H5g06430 | CX5g040625 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| C1H5g23722 | 5:23,847,619-23,848,189 | - | C2H5g22409 | CX5g038552 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| C1H5g29939 | 5:23,849,383-23,850,129 | + | C2H5g01350 | CX5g037414 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| C1H5g06457 | 5:23,855,904-23,856,859 | - | C2H5g11315 | CX5g040723 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| C1H5g14305 | 5:23,861,950-23,867,049 | - | C2H5g01570 | CX5g037383 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g00833 | 3:6,156,874-6,159,740 | - | C1H3g13331 | CX3g027611 | LOC_Os03g12930 | Os03g0231900 | - | Detail |
| C2H3g09594 | 3:6,162,907-6,164,923 | - | C1H3g17846 | CX3g030152 | LOC_Os03g12940 | Os03g0231950 | - | Detail |
| C2H3g04826 | 3:6,169,883-6,171,313 | - | C1H3g04613 | CX3g030910 | LOC_Os03g12940 | Os03g0232000 | OsFBO13 | Detail |
| C2H3g04774 | 3:6,176,440-6,180,711 | - | C1H3g30000 | CX3g029956 | LOC_Os03g12950 | Os03g0232200 | - | Detail |
| C2H3g26123 | 3:6,213,044-6,213,472 | + | C1H3g07150 | CX3g028212 | LOC_Os03g12990 | Os03g0232400 | - | Detail |
| C2H3g04799 | 3:6,217,496-6,217,914 | - | C1H3g22613 | CX3g028040 | - | Os02g0738300 | - | Detail |
| C2H3g26449 | 3:6,218,204-6,220,951 | + | C1H3g28102 | CX3g028651 | LOC_Os03g13000 | Os03g0232500 | - | Detail |
| C2H3g15250 | 3:6,226,447-6,227,826 | - | C1H3g02271 | CX3g031218 | LOC_Os03g13010 | Os03g0232600 | ELF1, OsPUB31, OsPUB75, TUD1, OsTUD1 | Detail |
| C2H3g13166 | 3:6,242,290-6,244,009 | - | C1H3g01497 | CX3g029569 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| C2H3g05297 | 3:6,245,343-6,249,107 | - | C1H3g06697 | CX3g027690 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| C2H3g03038 | 3:6,259,189-6,260,716 | + | C1H3g26874 | CX3g025391 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| C2H3g18690 | 3:6,262,896-6,263,675 | - | C1H3g16800 | CX3g030154 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| C2H3g14812 | 3:6,265,248-6,268,840 | - | C1H3g06079 | CX3g029185 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| C2H3g23005 | 3:6,272,046-6,275,587 | + | C1H3g06632 | CX3g028548 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| C2H3g09799 | 3:6,279,462-6,283,564 | + | C1H3g16553 | CX3g029407 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| C2H3g00329 | 3:6,284,070-6,297,053 | - | - | - | - | - | - | Detail |
| C2H3g17247 | 3:6,299,016-6,299,858 | - | C1H3g27731 | CX3g025432 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| C2H3g15076 | 3:6,302,555-6,307,791 | + | - | CX3g028989 | LOC_Os03g21310 | - | - | Detail |
| C2H3g00667 | 3:6,318,526-6,319,400 | + | C1H3g19664 | CX3g027207 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| C2H3g02090 | 3:6,321,649-6,322,638 | + | C1H3g02151 | CX3g030474 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |