| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g03913 | 5:23,600,852-23,603,088 | + | C2H5g10460 | CX5g036982 | LOC_Os05g50220 | Os05g0578000 | - | Detail |
| C1H5g20150 | 5:23,607,102-23,608,025 | - | C2H5g03748 | CX5g037412 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| C1H5g22642 | 5:23,614,448-23,617,680 | + | C2H5g13618 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C1H5g05740 | 5:23,619,939-23,620,858 | + | C2H5g26536 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C1H5g30673 | 5:23,622,238-23,626,286 | - | C2H5g20774 | CX5g039590 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| C1H5g18644 | 5:23,628,267-23,629,130 | + | C2H5g01414 | CX5g038128 | - | - | - | Detail |
| C1H5g30824 | 5:23,638,998-23,639,922 | + | C2H5g24268 | CX5g037556 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| C1H5g28939 | 5:23,640,680-23,645,549 | - | C2H5g28493 | CX5g037802 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| C1H5g17437 | 5:23,649,126-23,650,124 | + | C2H5g09709 | CX5g037992 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| C1H5g00625 | 5:23,652,781-23,654,715 | + | C2H5g24355 | CX5g039421 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| C1H5g28773 | 5:23,659,950-23,660,675 | + | C2H5g30078 | CX5g038909 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| C1H5g25217 | 5:23,672,989-23,673,594 | - | C2H5g16972 | CX5g037463 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| C1H5g24861 | 5:23,677,756-23,678,150 | - | C2H5g06063 | CX5g040775 | LOC_Os05g50350 | Os05g0579700 | - | Detail |
| C1H5g08314 | 5:23,684,030-23,686,749 | + | C2H5g20886 | CX5g040870 | LOC_Os05g50360 | Os05g0579800 | - | Detail |
| C1H5g24542 | 5:23,694,433-23,701,629 | + | C2H5g02301 | CX5g038555 | LOC_Os05g50370 | Os05g0579900 | - | Detail |
| C1H5g04263 | 5:23,702,286-23,707,469 | - | C2H5g26213 | CX5g040137 | LOC_Os05g50380 | Os05g0580000 | OsAGPL1, OsAPL3 | Detail |
| C1H5g02145 | 5:23,717,421-23,721,366 | + | C2H5g13644 | CX5g037650 | LOC_Os05g50410 | - | - | Detail |
| C1H5g24080 | 5:23,724,763-23,726,820 | + | C2H5g28264 | CX5g040658 | LOC_Os05g50460 | Os05g0581300 | - | Detail |
| C1H5g06864 | 5:23,737,397-23,738,215 | + | C2H5g17272 | CX5g037923 | LOC_Os05g50470 | Os05g0581700 | - | Detail |
| C1H5g11608 | 5:23,743,056-23,751,412 | + | C2H5g15909 | CX5g037805 | LOC_Os05g50480 | Os05g0581800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g28297 | 2:15,133,154-15,138,781 | - | C1H2g09069 | CX2g021428 | LOC_Os02g26400 | Os02g0462300 | - | Detail |
| C2H2g28912 | 2:15,143,193-15,144,942 | + | - | - | LOC_Os02g26404 | - | - | Detail |
| C2H2g04148 | 2:15,146,356-15,147,300 | + | C1H2g21982 | CX2g022930 | LOC_Os02g26430 | Os02g0462800 | WRKY42, OsWRKY42 | Detail |
| C2H2g20091 | 2:15,148,762-15,152,117 | + | C1H2g26806 | CX2g022979 | LOC_Os02g26440 | Os02g0462900 | - | Detail |
| C2H2g05390 | 2:15,180,722-15,180,973 | - | C1H2g18666 | - | LOC_Os02g26470 | Os02g0463401 | - | Detail |
| C2H2g12721 | 2:15,186,279-15,193,701 | - | C1H2g19353 | CX2g019545 | LOC_Os02g26480 | Os02g0463500 | - | Detail |
| C2H2g18685 | 2:15,210,840-15,215,209 | + | C1H2g26039 | CX2g022576 | LOC_Os02g26560 | Os02g0464500 | - | Detail |
| C2H2g05215 | 2:15,220,478-15,224,187 | - | C1H2g02830 | CX2g020584 | LOC_Os02g26600 | Os02g0464900 | - | Detail |
| C2H2g20421 | 2:15,240,926-15,247,245 | - | C1H2g24229 | CX2g024852 | LOC_Os02g26650 | Os02g0465400 | OsDHCR7 | Detail |
| C2H2g06691 | 2:15,269,481-15,273,721 | - | C1H2g25809 | CX2g022338 | LOC_Os02g26660 | Os02g0465500 | - | Detail |
| C2H2g12733 | 2:15,286,470-15,289,692 | - | C1H2g20670 | CX2g019150 | LOC_Os02g26700 | Os02g0465900 | OsARP, OsCTP | Detail |
| C2H2g15284 | 2:15,340,290-15,342,318 | - | C1H2g16591 | CX2g022703 | LOC_Os02g26770 | Os02g0467600 | - | Detail |
| C2H2g11442 | 2:15,347,090-15,349,097 | + | C1H2g27142 | CX2g020093 | LOC_Os02g26810 | Os02g0467600 | - | Detail |
| C2H2g03170 | 2:15,353,074-15,354,960 | + | C1H2g15767 | CX2g019894 | LOC_Os02g26814 | Os02g0467700 | - | Detail |
| C2H2g24861 | 2:15,367,569-15,370,994 | - | C1H2g10068 | CX2g023894 | LOC_Os02g26850 | Os02g0468200 | - | Detail |
| C2H2g01661 | 2:15,375,621-15,379,896 | + | C1H2g09034 | CX2g021964 | LOC_Os02g26860 | Os02g0468400 | - | Detail |
| C2H2g06654 | 2:15,419,188-15,423,575 | - | C1H2g08635 | CX2g020394 | LOC_Os02g26940 | Os02g0468800 | - | Detail |
| C2H2g29193 | 2:15,425,768-15,426,464 | - | C1H2g07044 | CX2g019451 | LOC_Os02g26950 | Os02g0468900 | - | Detail |
| C2H2g09996 | 2:15,429,937-15,430,692 | + | C1H2g28525 | CX2g024051 | LOC_Os02g26960 | Os02g0469000 | - | Detail |
| C2H2g27914 | 2:15,433,745-15,456,142 | + | C1H2g22501 | CX2g021400 | LOC_Os02g26984 | Os02g0469200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |