| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g18728 | 1:24,114,724-24,120,437 | + | C2H1g27469 | CX1g000692 | LOC_Os01g47450 | Os01g0664000 | - | Detail |
| C1H1g04364 | 1:24,121,739-24,127,906 | + | C2H1g19924 | CX1g006198 | LOC_Os01g47460 | Os01g0664100 | OsCZMT1 | Detail |
| C1H1g29903 | 1:24,128,871-24,132,456 | - | C2H1g18806 | CX1g003179 | LOC_Os01g47470 | Os01g0664200 | - | Detail |
| C1H1g16252 | 1:24,143,612-24,146,869 | + | C2H1g30339 | CX1g000544 | LOC_Os01g47490 | Os01g0664500 | - | Detail |
| C1H1g00404 | 1:24,165,191-24,171,837 | + | C2H1g17352 | CX1g003222 | LOC_Os01g47530 | Os01g0665200 | OsWJUMK1 | Detail |
| C1H1g07482 | 1:24,172,278-24,179,228 | - | C2H1g18506 | CX1g007169 | LOC_Os01g47540 | Os01g0665300 | - | Detail |
| C1H1g10753 | 1:24,179,689-24,180,060 | + | C2H1g19636 | - | - | - | - | Detail |
| C1H1g04478 | 1:24,182,982-24,187,775 | + | C2H1g09086 | CX1g004981 | LOC_Os01g47550 | Os01g0665400 | - | Detail |
| C1H1g10117 | 1:24,194,270-24,197,063 | - | C2H1g23227 | CX1g003271 | LOC_Os01g47560 | Os01g0665500 | - | Detail |
| C1H1g08061 | 1:24,237,650-24,240,050 | - | C2H1g09620 | CX1g002701 | LOC_Os01g47580 | Os01g0666000 | - | Detail |
| C1H1g22272 | 1:24,243,339-24,246,405 | + | C2H1g30465 | CX1g004856 | LOC_Os01g47600 | Os01g0666200 | - | Detail |
| C1H1g06997 | 1:24,247,036-24,249,204 | - | C2H1g20315 | CX1g005148 | LOC_Os01g47610 | Os01g0666400 | - | Detail |
| C1H1g13794 | 1:24,250,367-24,252,666 | - | C2H1g08177 | CX1g001286 | LOC_Os01g47620 | Os01g0666500 | - | Detail |
| C1H1g13937 | 1:24,253,069-24,254,542 | + | C2H1g01833 | CX1g005667 | LOC_Os01g47630 | Os01g0666600 | - | Detail |
| C1H1g31496 | 1:24,254,934-24,256,393 | - | C2H1g10090 | CX1g005314 | LOC_Os01g47635 | Os01g0895300 | - | Detail |
| C1H1g09475 | 1:24,263,634-24,272,824 | + | C2H1g17250 | CX1g003969 | LOC_Os01g47650 | Os01g0666800 | - | Detail |
| C1H1g19365 | 1:24,273,180-24,274,952 | - | C2H1g08141 | CX1g006414 | LOC_Os01g47660 | Os01g0752300 | - | Detail |
| C1H1g20685 | 1:24,275,792-24,277,021 | - | C2H1g30375 | CX1g001813 | LOC_Os01g47670 | Os01g0667000 | - | Detail |
| C1H1g10556 | 1:24,278,360-24,280,495 | - | C2H1g05332 | CX5g037646 | LOC_Os01g47680 | Os01g0667100 | - | Detail |
| C1H1g23877 | 1:24,281,392-24,285,189 | - | C2H1g14901 | CX1g007099 | LOC_Os01g47690 | Os01g0667200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08416 | 1:27,925,685-27,929,922 | + | C1H1g06199 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C2H1g22814 | 1:27,930,437-27,931,290 | + | C1H1g21519 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C2H1g20660 | 1:27,932,265-27,934,722 | + | C1H1g06931 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C2H1g21635 | 1:27,935,519-27,937,890 | + | C1H1g02075 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C2H1g02265 | 1:27,938,809-27,941,059 | + | C1H1g00896 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C2H1g14114 | 1:27,942,037-27,946,129 | - | C1H1g09179 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C2H1g10922 | 1:27,965,504-27,970,673 | + | C1H1g19262 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C2H1g29233 | 1:27,974,220-27,977,908 | + | C1H1g17809 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C2H1g09211 | 1:27,980,401-27,982,082 | - | C1H1g24495 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g25863 | 1:27,992,124-27,997,821 | + | C1H1g00277 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| C2H1g29243 | 1:28,006,149-28,009,921 | - | C1H1g12537 | - | LOC_Os01g54670 | Os01g0750500 | - | Detail |
| C2H1g03544 | 1:28,014,717-28,018,126 | - | C1H1g02730 | CX1g001248 | LOC_Os01g54700 | Os01g0750600 | - | Detail |
| C2H1g05225 | 1:28,029,339-28,029,912 | - | C1H1g08638 | CX1g000813 | LOC_Os01g53140 | Os01g0750800 | - | Detail |
| C2H1g04914 | 1:28,043,850-28,051,886 | + | C1H1g18828 | CX1g006345 | LOC_Os01g54784 | Os01g0751300 | - | Detail |
| C2H1g10063 | 1:28,056,456-28,059,326 | - | C1H1g01340 | CX1g003213 | LOC_Os01g54810 | Os01g0751600 | THIS1, This1 | Detail |
| C2H1g08663 | 1:28,061,852-28,063,890 | + | C1H1g28508 | CX1g001241 | LOC_Os01g54850 | Os01g0752100 | - | Detail |
| C2H1g27818 | 1:28,064,022-28,068,139 | - | C1H1g19975 | CX1g002849 | LOC_Os01g54860 | Os01g0752200 | NOG1 | Detail |
| C2H1g21432 | 1:28,070,490-28,072,113 | - | C1H1g04449 | CX1g004206 | LOC_Os01g54870 | Os01g0752300 | - | Detail |
| C2H1g04122 | 1:28,073,615-28,076,043 | - | C1H1g25368 | CX1g006705 | LOC_Os01g54880 | Os01g0752400 | - | Detail |
| C2H1g02082 | 1:28,080,846-28,086,760 | - | C1H1g06182 | CX1g007206 | LOC_Os01g54900 | Os01g0752600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |