| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03976 | 4:21,775,289-21,779,092 | + | C1H4g02468 | CX4g033880 | LOC_Os04g42570 | Os04g0504500 | - | Detail |
| C2H4g26755 | 4:21,780,931-21,784,591 | + | C1H4g08801 | CX4g034844 | LOC_Os04g42580 | Os04g0504600 | - | Detail |
| C2H4g20270 | 4:21,784,803-21,786,527 | - | C1H4g08459 | CX4g035367 | LOC_Os04g42590 | Os04g0504700 | - | Detail |
| C2H4g27949 | 4:21,787,811-21,794,217 | - | C1H4g18953 | CX4g034283 | LOC_Os04g42600 | Os04g0504800 | - | Detail |
| C2H4g13700 | 4:21,799,043-21,804,087 | + | C1H4g09949 | CX4g035894 | LOC_Os04g42610 | Os04g0505000 | - | Detail |
| C2H4g25893 | 4:21,808,733-21,810,094 | + | C1H4g26420 | CX4g033549 | LOC_Os04g42620 | Os04g0505200 | - | Detail |
| C2H4g26509 | 4:21,823,378-21,825,051 | - | - | CX4g036118 | LOC_Os04g42650 | Os04g0505400 | - | Detail |
| C2H4g26448 | 4:21,845,112-21,846,788 | - | C1H4g22256 | CX4g036362 | LOC_Os04g42670 | Os04g0505700 | - | Detail |
| C2H4g18722 | 4:21,853,620-21,855,080 | - | C1H4g20808 | CX4g034590 | LOC_Os04g42690 | Os04g0506000 | - | Detail |
| C2H4g22704 | 4:21,856,222-21,860,943 | - | C1H4g29579 | CX4g031779 | LOC_Os04g42700 | Os04g0506100 | - | Detail |
| C2H4g25253 | 4:21,875,815-21,879,797 | - | C1H4g02105 | CX4g035900 | LOC_Os04g42720 | Os04g0506300 | - | Detail |
| C2H4g08397 | 4:21,882,101-21,884,533 | + | C1H4g26221 | CX4g033680 | LOC_Os04g42740 | Os04g0506700 | SDRLK-29 | Detail |
| C2H4g07244 | 4:21,887,494-21,888,678 | + | - | - | LOC_Os04g42760 | Os04g0506800 | OsSTLP3 | Detail |
| C2H4g24051 | 4:21,899,801-21,905,681 | - | C1H4g22828 | CX4g032341 | LOC_Os04g42770 | Os04g0506900 | - | Detail |
| C2H4g08751 | 4:21,908,962-21,922,319 | - | C1H4g00682 | CX4g032669 | LOC_Os04g42784 | Os04g0507000 | - | Detail |
| C2H4g06679 | 4:21,923,349-21,924,878 | - | C1H4g13723 | CX4g035355 | LOC_Os04g42800 | - | - | Detail |
| C2H4g07568 | 4:21,926,839-21,928,280 | - | C1H4g11839 | CX4g032324 | LOC_Os04g42830 | Os04g0507400 | - | Detail |
| C2H4g22062 | 4:21,930,335-21,932,110 | - | C1H4g04437 | CX4g036634 | LOC_Os04g42830 | Os04g0507400 | - | Detail |
| C2H4g14077 | 4:21,933,409-21,944,824 | - | C1H4g00145 | CX4g034196 | LOC_Os04g42840 | Os04g0507500 | - | Detail |
| C2H4g29137 | 4:21,947,969-21,948,358 | - | C1H4g01460 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034365 | 4:22,303,520-22,308,857 | + | C1H4g19364 | C2H4g03267 | LOC_Os04g43700 | Os04g0517400 | - | Detail |
| CX4g036341 | 4:22,311,424-22,312,424 | + | C1H4g27983 | C2H4g18098 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| CX4g031725 | 4:22,316,539-22,318,968 | - | C1H4g02633 | C2H4g25250 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| CX4g034141 | 4:22,329,406-22,335,779 | - | C1H4g03662 | C2H4g17137 | LOC_Os04g44640 | Os02g0517900 | - | Detail |
| CX4g036203 | 4:22,340,595-22,341,107 | + | - | - | LOC_Os04g43740 | Os04g0517900 | - | Detail |
| CX4g032795 | 4:22,343,187-22,346,785 | - | C1H4g21239 | C2H4g18845 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| CX4g031424 | 4:22,351,676-22,354,229 | - | C1H4g17678 | C2H4g17450 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| CX4g031711 | 4:22,360,565-22,362,915 | - | C1H4g22637 | C2H4g28869 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| CX4g035029 | 4:22,371,274-22,371,441 | - | - | - | LOC_Os04g43820 | Os04g0518600 | - | Detail |
| CX4g035278 | 4:22,383,184-22,386,950 | + | C1H4g21094 | C2H4g12982 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| CX4g031681 | 4:22,402,187-22,404,488 | + | C1H4g30028 | C2H4g03913 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| CX4g033896 | 4:22,412,231-22,423,544 | - | C1H4g09015 | C2H4g13261 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| CX4g033084 | 4:22,424,705-22,428,846 | - | C1H4g07978 | C2H4g00328 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| CX4g032290 | 4:22,432,280-22,432,765 | + | - | - | - | - | - | Detail |
| CX4g032805 | 4:22,435,274-22,435,753 | - | - | C2H4g21426 | LOC_Os04g43990 | Os04g0520700 | OsS40-13 | Detail |
| CX4g034414 | 4:22,441,418-22,442,812 | + | C1H4g05728 | C2H4g11598 | LOC_Os04g44030 | Os04g0520900 | - | Detail |
| CX4g032514 | 4:22,449,441-22,451,500 | + | C1H4g29455 | C2H4g13133 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| CX4g034857 | 4:22,455,857-22,456,225 | + | C1H4g05956 | C2H4g17426 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| CX4g032134 | 4:22,458,913-22,462,661 | + | C1H4g04229 | C2H4g09903 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| CX4g031385 | 4:22,464,830-22,465,057 | - | - | - | - | - | - | Detail |