| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22787 | 4:21,251,967-21,255,730 | + | C1H4g27682 | CX4g031686 | LOC_Os04g41500 | Os04g0492400 | - | Detail |
| C2H4g27511 | 4:21,256,106-21,271,309 | + | C1H4g23200 | CX4g036315 | LOC_Os04g41510 | Os04g0492500 | - | Detail |
| C2H4g03072 | 4:21,274,481-21,275,248 | + | C1H4g00637 | CX4g035635 | LOC_Os04g41540 | Os04g0492800 | - | Detail |
| C2H4g14526 | 4:21,278,683-21,278,955 | - | - | - | - | - | - | Detail |
| C2H4g11011 | 4:21,278,716-21,282,560 | + | C1H4g21073 | CX4g033186 | LOC_Os04g41550 | Os04g0492900 | - | Detail |
| C2H4g23397 | 4:21,282,921-21,283,931 | - | C1H4g24972 | CX4g035048 | LOC_Os04g41560 | Os04g0493000 | OsBBX11 | Detail |
| C2H4g12805 | 4:21,288,937-21,289,857 | - | C1H4g20351 | CX4g036488 | LOC_Os04g41570 | Os04g0493100 | - | Detail |
| C2H4g13607 | 4:21,301,452-21,304,544 | - | C1H4g27725 | CX4g036094 | LOC_Os04g41580 | Os04g0493300 | - | Detail |
| C2H4g26460 | 4:21,310,487-21,310,858 | - | C1H4g28922 | CX4g034458 | LOC_Os04g41620 | Os04g0493400 | OsChia2b, Cht4 | Detail |
| C2H4g25846 | 4:21,311,343-21,311,633 | - | C1H4g28922 | CX4g034458 | LOC_Os04g41620 | Os04g0493400 | OsChia2b, Cht4 | Detail |
| C2H4g19317 | 4:21,313,827-21,314,102 | - | C1H4g13597 | CX4g032644 | LOC_Os04g41640 | Os04g0493600 | - | Detail |
| C2H4g19448 | 4:21,318,487-21,319,448 | - | C1H4g17237 | CX4g032644 | LOC_Os04g41680 | Os04g0494100 | OsChia4a, Cht5 | Detail |
| C2H4g22711 | 4:21,326,916-21,329,351 | + | C1H4g09263 | - | LOC_Os04g41710 | Os04g0494600 | - | Detail |
| C2H4g14372 | 4:21,338,117-21,339,541 | + | C1H4g07021 | - | LOC_Os04g41740 | Os04g0494800 | - | Detail |
| C2H4g03458 | 4:21,341,851-21,343,237 | + | C1H4g11237 | - | LOC_Os04g41750 | Os04g0494900 | - | Detail |
| C2H4g08263 | 4:21,344,041-21,345,389 | + | C1H4g16985 | - | LOC_Os04g41759 | Os04g0494950 | - | Detail |
| C2H4g02443 | 4:21,348,846-21,351,436 | + | C1H4g18754 | - | LOC_Os04g41770 | Os04g0495000 | - | Detail |
| C2H4g21095 | 4:21,360,411-21,360,899 | + | - | CX4g031634 | LOC_Os04g41800 | Os04g0495300 | - | Detail |
| C2H4g12186 | 4:21,365,940-21,369,076 | + | C1H4g14867 | CX4g036530 | LOC_Os04g41810 | Os04g0495400 | - | Detail |
| C2H4g17209 | 4:21,369,465-21,372,944 | - | C1H4g27163 | CX4g035960 | LOC_Os04g41820 | Os04g0495500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034365 | 4:22,303,520-22,308,857 | + | C1H4g19364 | C2H4g03267 | LOC_Os04g43700 | Os04g0517400 | - | Detail |
| CX4g036341 | 4:22,311,424-22,312,424 | + | C1H4g27983 | C2H4g18098 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| CX4g031725 | 4:22,316,539-22,318,968 | - | C1H4g02633 | C2H4g25250 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| CX4g034141 | 4:22,329,406-22,335,779 | - | C1H4g03662 | C2H4g17137 | LOC_Os04g44640 | Os02g0517900 | - | Detail |
| CX4g036203 | 4:22,340,595-22,341,107 | + | - | - | LOC_Os04g43740 | Os04g0517900 | - | Detail |
| CX4g032795 | 4:22,343,187-22,346,785 | - | C1H4g21239 | C2H4g18845 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| CX4g031424 | 4:22,351,676-22,354,229 | - | C1H4g17678 | C2H4g17450 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| CX4g031711 | 4:22,360,565-22,362,915 | - | C1H4g22637 | C2H4g28869 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| CX4g035029 | 4:22,371,274-22,371,441 | - | - | - | LOC_Os04g43820 | Os04g0518600 | - | Detail |
| CX4g035278 | 4:22,383,184-22,386,950 | + | C1H4g21094 | C2H4g12982 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| CX4g031681 | 4:22,402,187-22,404,488 | + | C1H4g30028 | C2H4g03913 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| CX4g033896 | 4:22,412,231-22,423,544 | - | C1H4g09015 | C2H4g13261 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| CX4g033084 | 4:22,424,705-22,428,846 | - | C1H4g07978 | C2H4g00328 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| CX4g032290 | 4:22,432,280-22,432,765 | + | - | - | - | - | - | Detail |
| CX4g032805 | 4:22,435,274-22,435,753 | - | - | C2H4g21426 | LOC_Os04g43990 | Os04g0520700 | OsS40-13 | Detail |
| CX4g034414 | 4:22,441,418-22,442,812 | + | C1H4g05728 | C2H4g11598 | LOC_Os04g44030 | Os04g0520900 | - | Detail |
| CX4g032514 | 4:22,449,441-22,451,500 | + | C1H4g29455 | C2H4g13133 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| CX4g034857 | 4:22,455,857-22,456,225 | + | C1H4g05956 | C2H4g17426 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| CX4g032134 | 4:22,458,913-22,462,661 | + | C1H4g04229 | C2H4g09903 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| CX4g031385 | 4:22,464,830-22,465,057 | - | - | - | - | - | - | Detail |