| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g02326 | 4:20,896,673-20,899,990 | + | C2H4g22198 | CX4g032128 | LOC_Os04g40400 | Os04g0480100 | - | Detail |
| C1H4g02234 | 4:20,902,082-20,903,078 | - | C2H4g13593 | CX4g035970 | LOC_Os04g40410 | Os04g0480200 | OsNAR2.2 | Detail |
| C1H4g08203 | 4:20,904,190-20,908,641 | + | C2H4g10651 | CX4g031651 | LOC_Os04g40420 | Os04g0480300 | - | Detail |
| C1H4g03377 | 4:20,909,487-20,912,056 | + | C2H4g01241 | CX4g032839 | LOC_Os04g40430 | Os04g0480400 | - | Detail |
| C1H4g22344 | 4:20,912,878-20,916,215 | + | C2H4g02108 | CX4g034579 | LOC_Os04g40440 | Os04g0480500 | - | Detail |
| C1H4g27047 | 4:20,918,563-20,921,371 | - | C2H4g07141 | CX4g035688 | LOC_Os04g40460 | Os04g0480700 | - | Detail |
| C1H4g02669 | 4:20,924,852-20,926,721 | - | C2H4g07141 | CX4g035688 | LOC_Os04g40470 | Os04g0480650 | - | Detail |
| C1H4g02386 | 4:20,928,495-20,928,960 | + | - | - | - | - | - | Detail |
| C1H4g27434 | 4:20,928,997-20,929,529 | + | C2H4g24183 | - | - | - | - | Detail |
| C1H4g22198 | 4:20,929,658-20,932,966 | + | C2H4g27287 | CX4g035420 | LOC_Os04g40490 | Os04g0480900 | - | Detail |
| C1H4g12967 | 4:20,934,834-20,937,355 | + | C2H4g06758 | CX4g035420 | LOC_Os04g40500 | Os04g0481000 | - | Detail |
| C1H4g27122 | 4:20,944,626-20,945,225 | + | C2H4g19832 | CX4g035145 | LOC_Os04g40510 | Os04g0481200 | - | Detail |
| C1H4g09900 | 4:20,945,245-20,945,463 | + | C2H4g19832 | CX4g035145 | LOC_Os04g40510 | Os04g0481200 | - | Detail |
| C1H4g04059 | 4:20,945,849-20,946,997 | + | C2H4g19832 | CX4g035145 | LOC_Os04g40510 | Os04g0481200 | - | Detail |
| C1H4g30807 | 4:20,947,263-20,951,458 | - | C2H4g27069 | CX4g033422 | LOC_Os04g40520 | Os04g0481100 | - | Detail |
| C1H4g28363 | 4:20,952,591-20,953,780 | + | C2H4g01816 | CX4g032691 | LOC_Os04g40530 | Os04g0481300 | - | Detail |
| C1H4g26467 | 4:20,954,257-20,956,070 | - | C2H4g14800 | CX4g033470 | LOC_Os04g40540 | Os04g0481400 | PIMT2, OsPIMT2 | Detail |
| C1H4g30891 | 4:20,957,077-20,958,765 | - | C2H4g02100 | CX4g036535 | LOC_Os04g40550 | Os04g0481500 | - | Detail |
| C1H4g04703 | 4:20,975,783-20,980,278 | + | C2H4g05692 | CX4g036548 | LOC_Os04g40570 | Os04g0481700 | - | Detail |
| C1H4g19577 | 4:20,985,447-20,986,827 | - | C2H4g06893 | CX4g033202 | LOC_Os04g40600 | Os04g0482000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034365 | 4:22,303,520-22,308,857 | + | C1H4g19364 | C2H4g03267 | LOC_Os04g43700 | Os04g0517400 | - | Detail |
| CX4g036341 | 4:22,311,424-22,312,424 | + | C1H4g27983 | C2H4g18098 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| CX4g031725 | 4:22,316,539-22,318,968 | - | C1H4g02633 | C2H4g25250 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| CX4g034141 | 4:22,329,406-22,335,779 | - | C1H4g03662 | C2H4g17137 | LOC_Os04g44640 | Os02g0517900 | - | Detail |
| CX4g036203 | 4:22,340,595-22,341,107 | + | - | - | LOC_Os04g43740 | Os04g0517900 | - | Detail |
| CX4g032795 | 4:22,343,187-22,346,785 | - | C1H4g21239 | C2H4g18845 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| CX4g031424 | 4:22,351,676-22,354,229 | - | C1H4g17678 | C2H4g17450 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| CX4g031711 | 4:22,360,565-22,362,915 | - | C1H4g22637 | C2H4g28869 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| CX4g035029 | 4:22,371,274-22,371,441 | - | - | - | LOC_Os04g43820 | Os04g0518600 | - | Detail |
| CX4g035278 | 4:22,383,184-22,386,950 | + | C1H4g21094 | C2H4g12982 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| CX4g031681 | 4:22,402,187-22,404,488 | + | C1H4g30028 | C2H4g03913 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| CX4g033896 | 4:22,412,231-22,423,544 | - | C1H4g09015 | C2H4g13261 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| CX4g033084 | 4:22,424,705-22,428,846 | - | C1H4g07978 | C2H4g00328 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| CX4g032290 | 4:22,432,280-22,432,765 | + | - | - | - | - | - | Detail |
| CX4g032805 | 4:22,435,274-22,435,753 | - | - | C2H4g21426 | LOC_Os04g43990 | Os04g0520700 | OsS40-13 | Detail |
| CX4g034414 | 4:22,441,418-22,442,812 | + | C1H4g05728 | C2H4g11598 | LOC_Os04g44030 | Os04g0520900 | - | Detail |
| CX4g032514 | 4:22,449,441-22,451,500 | + | C1H4g29455 | C2H4g13133 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| CX4g034857 | 4:22,455,857-22,456,225 | + | C1H4g05956 | C2H4g17426 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| CX4g032134 | 4:22,458,913-22,462,661 | + | C1H4g04229 | C2H4g09903 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| CX4g031385 | 4:22,464,830-22,465,057 | - | - | - | - | - | - | Detail |