| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14659 | 4:28,616,883-28,626,167 | - | C1H4g09395 | CX4g033850 | LOC_Os04g55730 | Os04g0650900 | - | Detail |
| C2H4g14244 | 4:28,626,940-28,628,324 | - | C1H4g15692 | CX4g032222 | LOC_Os04g55740 | Os04g0651000 | - | Detail |
| C2H4g04267 | 4:28,645,746-28,646,433 | - | C1H4g22868 | CX4g035054 | LOC_Os04g57920 | Os04g0651600 | - | Detail |
| C2H4g03455 | 4:28,660,914-28,666,233 | - | C1H4g05341 | CX4g033402 | LOC_Os04g55800 | Os04g0652400 | - | Detail |
| C2H4g14893 | 4:28,663,075-28,665,418 | + | - | - | - | Os04g0652450 | - | Detail |
| C2H4g29917 | 4:28,673,856-28,678,237 | - | C1H4g19231 | CX4g035476 | LOC_Os04g55810 | Os04g0652500 | - | Detail |
| C2H4g13053 | 4:28,679,430-28,685,604 | + | C1H4g21279 | CX4g034733 | LOC_Os04g55840 | Os04g0652600 | - | Detail |
| C2H4g17182 | 4:28,687,510-28,687,912 | + | C1H4g27223 | CX4g032019 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| C2H4g24107 | 4:28,688,902-28,689,950 | + | C1H4g01148 | CX4g034882 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| C2H4g15013 | 4:28,691,427-28,693,560 | - | C1H4g09382 | CX4g035227 | LOC_Os04g55860 | Os04g0652900 | - | Detail |
| C2H4g11780 | 4:28,711,259-28,715,440 | + | C1H4g27108 | CX4g034020 | LOC_Os04g55920 | Os04g0653000 | EG2, OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, EG2/OsJAZ1, JAZ1/EG2 | Detail |
| C2H4g28993 | 4:28,715,507-28,717,713 | - | C1H4g20973 | CX4g036062 | LOC_Os04g55930 | Os04g0653100 | - | Detail |
| C2H4g12547 | 4:28,719,040-28,723,511 | + | C1H4g27383 | CX4g034519 | LOC_Os04g55940 | Os04g0653200 | OsCAX3 | Detail |
| C2H4g01169 | 4:28,729,714-28,730,357 | + | C1H4g14097 | - | LOC_Os04g55950 | Os04g0653300 | - | Detail |
| C2H4g18627 | 4:28,734,367-28,740,420 | + | C1H4g13362 | CX4g033116 | LOC_Os04g55960 | Os04g0653400 | - | Detail |
| C2H4g04898 | 4:28,749,350-28,753,245 | + | C1H4g12359 | CX4g031647 | LOC_Os04g55970 | Os04g0653600 | - | Detail |
| C2H4g22789 | 4:28,755,631-28,755,891 | - | - | CX4g034121 | LOC_Os04g56010 | - | - | Detail |
| C2H4g03477 | 4:28,757,268-28,757,591 | - | - | CX4g034121 | LOC_Os04g56010 | - | - | Detail |
| C2H4g01694 | 4:28,759,668-28,760,728 | - | C1H4g06436 | CX4g035335 | LOC_Os04g56030 | Os04g0654400 | - | Detail |
| C2H4g03782 | 4:28,762,415-28,763,011 | - | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033268 | 4:22,131,019-22,135,643 | - | C1H4g13563 | C2H4g29440 | LOC_Os04g43340 | Os04g0512900 | - | Detail |
| CX4g031530 | 4:22,136,160-22,137,552 | + | C1H4g16567 | C2H4g12957 | LOC_Os04g43350 | Os04g0513000 | - | Detail |
| CX4g036275 | 4:22,176,304-22,176,633 | - | - | C2H4g24186 | - | - | - | Detail |
| CX4g035316 | 4:22,177,628-22,179,522 | + | C1H4g08265 | C2H4g06239 | LOC_Os04g43420 | Os04g0514400 | - | Detail |
| CX4g032808 | 4:22,180,811-22,183,908 | - | C1H4g12183 | C2H4g14084 | LOC_Os04g43430 | Os04g0514500 | - | Detail |
| CX4g032578 | 4:22,185,096-22,189,392 | - | C1H4g00643 | C2H4g28560 | LOC_Os04g43440 | Os04g0514600 | - | Detail |
| CX4g035553 | 4:22,192,734-22,196,415 | - | C1H4g05501 | C2H4g20498 | LOC_Os04g43490 | Os04g0514800 | - | Detail |
| CX4g036199 | 4:22,206,403-22,206,609 | - | - | - | - | - | - | Detail |
| CX4g034547 | 4:22,207,525-22,209,186 | - | C1H4g03273 | C2H4g19370 | LOC_Os02g40880 | Os04g0515300 | - | Detail |
| CX4g032382 | 4:22,210,104-22,213,013 | + | C1H4g25523 | C2H4g03762 | LOC_Os04g43550 | Os04g0515400 | - | Detail |
| CX4g032209 | 4:22,214,414-22,214,719 | + | - | - | - | - | - | Detail |
| CX4g032860 | 4:22,215,461-22,218,203 | - | C1H3g23204 | C2H4g00895 | LOC_Os03g08700 | Os03g0185500 | - | Detail |
| CX4g033164 | 4:22,224,299-22,224,505 | - | - | - | - | Os04g0385650 | - | Detail |
| CX4g035986 | 4:22,226,213-22,226,398 | + | - | - | - | - | - | Detail |
| CX4g031507 | 4:22,232,709-22,234,524 | + | C1H4g27910 | C2H4g24134 | LOC_Os04g43560 | Os04g0515900 | - | Detail |
| CX4g034816 | 4:22,264,651-22,266,947 | - | C1H4g23819 | C2H4g21844 | LOC_Os04g43650 | Os04g0516600 | - | Detail |
| CX4g035460 | 4:22,276,399-22,277,922 | + | C1H4g30570 | C2H4g17407 | LOC_Os04g43660 | Os04g0516900 | - | Detail |
| CX4g032257 | 4:22,278,694-22,280,425 | + | C1H4g13624 | C2H4g08355 | LOC_Os04g43670 | Os04g0517000 | - | Detail |
| CX4g033299 | 4:22,286,196-22,287,743 | - | C1H4g07527 | C2H4g12515 | LOC_Os04g43680 | Os04g0517100 | OsMyb4, MYB55 | Detail |
| CX4g034783 | 4:22,297,159-22,303,193 | - | C1H4g10053 | C2H4g00297 | LOC_Os04g43690 | Os04g0517300 | - | Detail |