| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01891 | 1:28,804,103-28,805,391 | - | C1H1g00876 | CX1g003833 | LOC_Os01g56070 | Os01g0766200 | - | Detail |
| C2H1g17996 | 1:28,807,817-28,808,548 | + | C1H1g18862 | CX1g000494 | LOC_Os12g07170 | Os01g0872900 | - | Detail |
| C2H1g14203 | 1:28,810,030-28,811,934 | - | C1H1g13664 | CX1g004570 | LOC_Os12g12690 | Os01g0527900 | - | Detail |
| C2H1g09451 | 1:28,823,578-28,824,686 | + | C1H1g10462 | CX1g000212 | LOC_Os01g56090 | Os01g0766400 | - | Detail |
| C2H1g11262 | 1:28,829,620-28,833,903 | + | C1H1g05983 | CX1g004309 | LOC_Os01g56100 | Os01g0766600 | - | Detail |
| C2H1g27726 | 1:28,853,152-28,856,797 | - | C1H1g11621 | CX1g002848 | LOC_Os01g56130 | Os01g0766900 | OsCSLC1 | Detail |
| C2H1g25186 | 1:28,862,323-28,867,547 | - | C1H1g23773 | CX1g006079 | LOC_Os01g56140 | Os01g0767000 | OsNMCP1 | Detail |
| C2H1g12650 | 1:28,869,195-28,872,753 | - | C1H1g07882 | CX1g002490 | LOC_Os01g56150 | Os01g0767100 | - | Detail |
| C2H1g17994 | 1:28,879,596-28,882,208 | + | C1H1g20009 | CX1g005086 | LOC_Os01g56180 | Os01g0767600 | - | Detail |
| C2H1g02356 | 1:28,882,754-28,892,859 | + | C1H1g00590 | CX1g007067 | LOC_Os01g56190 | Os01g0767700 | - | Detail |
| C2H1g28755 | 1:28,899,247-28,902,370 | + | C1H1g02614 | CX1g005068 | LOC_Os01g56200 | Os01g0767900 | - | Detail |
| C2H1g28135 | 1:28,903,763-28,904,524 | - | C1H1g10000 | CX1g005201 | LOC_Os01g56220 | Os01g0768100 | - | Detail |
| C2H1g25364 | 1:28,905,795-28,906,043 | + | - | - | - | - | - | Detail |
| C2H1g22289 | 1:28,906,228-28,906,515 | + | C1H1g16919 | CX1g002369 | - | - | - | Detail |
| C2H1g30374 | 1:28,907,288-28,910,805 | - | C1H1g17993 | CX1g001137 | LOC_Os01g56230 | Os01g0768200 | - | Detail |
| C2H1g26550 | 1:28,913,363-28,915,373 | - | C1H1g11693 | CX1g002315 | LOC_Os01g56235 | Os01g0768300 | - | Detail |
| C2H1g30140 | 1:28,917,092-28,917,463 | + | C1H1g01409 | CX1g002605 | LOC_Os01g56240 | Os01g0768333 | OsSAUR2 | Detail |
| C2H1g24802 | 1:28,929,582-28,935,150 | + | C1H1g26530 | CX1g000267 | LOC_Os01g56290 | Os01g0768700 | - | Detail |
| C2H1g13364 | 1:28,936,882-28,943,015 | + | C1H1g09383 | CX1g006707 | LOC_Os01g43980 | - | - | Detail |
| C2H1g11170 | 1:28,949,464-28,956,140 | + | C1H1g30094 | CX1g001998 | LOC_Os01g56300 | Os01g0769000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036052 | 4:21,992,972-21,995,000 | - | C1H4g05629 | C2H4g25209 | LOC_Os04g43040 | Os04g0509200 | - | Detail |
| CX4g034232 | 4:21,997,882-22,006,361 | - | C1H4g11981 | C2H4g20441 | LOC_Os04g43050 | Os04g0509300 | DCL4, OsDCL4, Os DCL4, Dcl4 | Detail |
| CX4g036588 | 4:22,020,526-22,021,304 | + | C1H4g16776 | C2H4g11339 | LOC_Os04g43060 | Os04g0509400 | - | Detail |
| CX4g033016 | 4:22,027,695-22,029,131 | - | - | - | - | Os04g0509500 | - | Detail |
| CX4g031959 | 4:22,036,787-22,036,939 | + | - | - | - | Os07g0616100 | - | Detail |
| CX4g031449 | 4:22,043,728-22,051,547 | + | C1H4g26953 | C2H4g26482 | LOC_Os04g43130 | Os04g0510300 | - | Detail |
| CX4g031438 | 4:22,052,562-22,058,501 | - | C1H4g20471 | C2H4g00596 | LOC_Os04g43140 | Os04g0510400 | - | Detail |
| CX4g033377 | 4:22,059,906-22,060,067 | - | - | - | - | - | - | Detail |
| CX4g035958 | 4:22,061,569-22,066,460 | + | C1H4g03093 | C2H4g19563 | LOC_Os04g43150 | Os04g0510500 | - | Detail |
| CX4g032117 | 4:22,067,399-22,068,521 | - | C1H4g15211 | C2H4g02205 | LOC_Os04g43160 | Os04g0510600 | - | Detail |
| CX4g033894 | 4:22,069,301-22,071,814 | - | C1H4g29813 | C2H4g20983 | LOC_Os04g43164 | Os04g0510700 | - | Detail |
| CX4g036379 | 4:22,072,896-22,074,217 | - | C1H4g14181 | C2H4g07283 | LOC_Os04g43170 | Os04g0510900 | - | Detail |
| CX4g033517 | 4:22,076,408-22,077,850 | - | C1H4g05553 | C2H4g15069 | LOC_Os04g43200 | Os04g0511200 | OsClo5, OsEFA27 | Detail |
| CX4g033340 | 4:22,079,477-22,081,951 | - | C1H4g09400 | C2H4g28433 | LOC_Os04g43210 | Os04g0511400 | - | Detail |
| CX4g035801 | 4:22,085,731-22,089,912 | - | C1H4g08179 | C2H4g23749 | LOC_Os04g43220 | Os04g0511600 | - | Detail |
| CX4g032463 | 4:22,093,049-22,095,036 | - | C1H4g06483 | C2H4g20352 | LOC_Os04g43230 | Os04g0511700 | - | Detail |
| CX4g032044 | 4:22,098,270-22,104,622 | - | C1H4g23962 | C2H4g11071 | LOC_Os04g43270 | Os04g0512200 | - | Detail |
| CX4g033280 | 4:22,108,331-22,110,905 | - | C1H4g05127 | C2H4g01985 | LOC_Os04g43290 | Os04g0512300 | OsGASD | Detail |
| CX4g034378 | 4:22,111,602-22,115,246 | - | C1H4g19931 | C2H4g16701 | LOC_Os04g43300 | Os04g0512400 | - | Detail |
| CX4g035063 | 4:22,117,901-22,118,296 | - | C1H4g27340 | C2H4g10802 | LOC_Os04g43310 | Os04g0512500 | - | Detail |