| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02804 | 5:6,439,314-6,440,576 | - | C2H5g03653 | CX5g040020 | LOC_Os05g13830 | Os05g0225800 | - | Detail |
| C1H5g10162 | 5:6,461,499-6,467,250 | - | C2H5g02747 | CX5g038294 | LOC_Os05g13950 | Os05g0227700 | - | Detail |
| C1H5g19329 | 5:6,468,027-6,469,256 | + | C2H5g07936 | CX5g037077 | LOC_Os05g13960 | Os05g0227800 | - | Detail |
| C1H5g22405 | 5:6,476,404-6,481,147 | - | C2H5g05694 | CX5g037937 | LOC_Os05g13970 | Os05g0228000 | - | Detail |
| C1H5g20540 | 5:6,493,474-6,501,091 | - | C2H5g19208 | CX5g037757 | LOC_Os05g14010 | Os05g0228400 | - | Detail |
| C1H5g09055 | 5:6,546,925-6,547,512 | + | C2H5g10323 | CX5g038878 | LOC_Os05g14130 | Os05g0286100 | OsZFP350 | Detail |
| C1H5g25378 | 5:6,559,474-6,568,921 | + | C2H5g00942 | CX5g037103 | LOC_Os05g14170 | Os05g0230600 | - | Detail |
| C1H5g10636 | 5:6,585,908-6,589,434 | + | C2H5g20643 | CX5g038357 | LOC_Os05g14180 | Os05g0230700 | - | Detail |
| C1H5g03159 | 5:6,598,306-6,603,975 | - | C2H5g06311 | CX5g040395 | LOC_Os05g14194 | Os05g0230900 | FLO15, OsGLYI7 | Detail |
| C1H5g10690 | 5:6,623,287-6,625,052 | - | C2H5g02872 | CX5g038563 | LOC_Os05g14220 | Os05g0231100 | - | Detail |
| C1H5g26011 | 5:6,688,035-6,690,294 | + | C2H5g24388 | CX5g038538 | LOC_Os05g14240 | Os05g0231700 | - | Detail |
| C1H5g10613 | 5:6,691,906-6,693,331 | - | C2H5g24001 | CX5g039688 | LOC_Os05g14260 | Os05g0499300 | - | Detail |
| C1H5g06357 | 5:6,698,159-6,702,862 | + | C2H5g11100 | CX5g037224 | LOC_Os05g14270 | Os05g0232200 | - | Detail |
| C1H5g14640 | 5:6,703,663-6,704,820 | - | C2H5g09281 | CX5g036769 | LOC_Os05g11370 | Os05g0203500 | - | Detail |
| C1H5g06930 | 5:6,712,797-6,717,868 | + | C2H5g29959 | CX5g038655 | LOC_Os05g14300 | Os05g0232500 | - | Detail |
| C1H5g02144 | 5:6,734,138-6,735,825 | + | C2H5g10865 | CX5g041107 | LOC_Os05g14370 | Os05g0571200 | OsWRKY19 | Detail |
| C1H5g21646 | 5:6,825,795-6,851,545 | + | C2H5g07002 | CX5g040240 | LOC_Os05g08810 | Os05g0235300 | OsTOR, TOR | Detail |
| C1H5g11004 | 5:6,855,983-6,856,536 | - | C2H5g24114 | CX5g040852 | LOC_Os05g14580 | Os05g0235701 | - | Detail |
| C1H5g23614 | 5:6,871,322-6,877,810 | + | C2H5g24097 | CX5g041153 | LOC_Os05g14590 | Os05g0235800 | - | Detail |
| C1H5g11422 | 5:6,910,095-6,916,773 | + | C2H5g30498 | CX5g038991 | LOC_Os05g14730 | Os05g0237100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036052 | 4:21,992,972-21,995,000 | - | C1H4g05629 | C2H4g25209 | LOC_Os04g43040 | Os04g0509200 | - | Detail |
| CX4g034232 | 4:21,997,882-22,006,361 | - | C1H4g11981 | C2H4g20441 | LOC_Os04g43050 | Os04g0509300 | DCL4, OsDCL4, Os DCL4, Dcl4 | Detail |
| CX4g036588 | 4:22,020,526-22,021,304 | + | C1H4g16776 | C2H4g11339 | LOC_Os04g43060 | Os04g0509400 | - | Detail |
| CX4g033016 | 4:22,027,695-22,029,131 | - | - | - | - | Os04g0509500 | - | Detail |
| CX4g031959 | 4:22,036,787-22,036,939 | + | - | - | - | Os07g0616100 | - | Detail |
| CX4g031449 | 4:22,043,728-22,051,547 | + | C1H4g26953 | C2H4g26482 | LOC_Os04g43130 | Os04g0510300 | - | Detail |
| CX4g031438 | 4:22,052,562-22,058,501 | - | C1H4g20471 | C2H4g00596 | LOC_Os04g43140 | Os04g0510400 | - | Detail |
| CX4g033377 | 4:22,059,906-22,060,067 | - | - | - | - | - | - | Detail |
| CX4g035958 | 4:22,061,569-22,066,460 | + | C1H4g03093 | C2H4g19563 | LOC_Os04g43150 | Os04g0510500 | - | Detail |
| CX4g032117 | 4:22,067,399-22,068,521 | - | C1H4g15211 | C2H4g02205 | LOC_Os04g43160 | Os04g0510600 | - | Detail |
| CX4g033894 | 4:22,069,301-22,071,814 | - | C1H4g29813 | C2H4g20983 | LOC_Os04g43164 | Os04g0510700 | - | Detail |
| CX4g036379 | 4:22,072,896-22,074,217 | - | C1H4g14181 | C2H4g07283 | LOC_Os04g43170 | Os04g0510900 | - | Detail |
| CX4g033517 | 4:22,076,408-22,077,850 | - | C1H4g05553 | C2H4g15069 | LOC_Os04g43200 | Os04g0511200 | OsClo5, OsEFA27 | Detail |
| CX4g033340 | 4:22,079,477-22,081,951 | - | C1H4g09400 | C2H4g28433 | LOC_Os04g43210 | Os04g0511400 | - | Detail |
| CX4g035801 | 4:22,085,731-22,089,912 | - | C1H4g08179 | C2H4g23749 | LOC_Os04g43220 | Os04g0511600 | - | Detail |
| CX4g032463 | 4:22,093,049-22,095,036 | - | C1H4g06483 | C2H4g20352 | LOC_Os04g43230 | Os04g0511700 | - | Detail |
| CX4g032044 | 4:22,098,270-22,104,622 | - | C1H4g23962 | C2H4g11071 | LOC_Os04g43270 | Os04g0512200 | - | Detail |
| CX4g033280 | 4:22,108,331-22,110,905 | - | C1H4g05127 | C2H4g01985 | LOC_Os04g43290 | Os04g0512300 | OsGASD | Detail |
| CX4g034378 | 4:22,111,602-22,115,246 | - | C1H4g19931 | C2H4g16701 | LOC_Os04g43300 | Os04g0512400 | - | Detail |
| CX4g035063 | 4:22,117,901-22,118,296 | - | C1H4g27340 | C2H4g10802 | LOC_Os04g43310 | Os04g0512500 | - | Detail |