| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27777 | 1:26,903,577-26,904,881 | + | C2H1g14542 | CX1g000877 | LOC_Os01g52380 | Os01g0721800 | - | Detail |
| C1H1g16429 | 1:26,907,034-26,909,887 | - | C2H1g03938 | CX1g001695 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| C1H1g19540 | 1:26,913,451-26,917,004 | + | C2H1g29212 | CX1g005554 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| C1H1g14417 | 1:26,925,623-26,927,295 | + | C2H1g15644 | CX1g004391 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| C1H1g17552 | 1:26,938,467-26,942,242 | + | C2H1g14945 | CX1g002677 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| C1H1g17968 | 1:26,946,286-26,949,083 | - | C2H1g16107 | CX1g001570 | LOC_Os01g52470 | Os01g0723000 | - | Detail |
| C1H1g22223 | 1:26,951,203-26,952,076 | + | C2H1g09375 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g00329 | 1:26,952,184-26,952,905 | + | C2H1g00796 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g27397 | 1:26,953,685-26,955,175 | - | C2H1g00282 | CX1g004240 | LOC_Os01g52490 | Os01g0723200 | - | Detail |
| C1H1g18013 | 1:26,962,480-26,968,150 | + | C2H1g25823 | CX1g001850 | LOC_Os01g52500 | Os01g0723400 | NADP-ME2, Os-NADP-ME2, Os-NADP-ME2-2 | Detail |
| C1H1g17264 | 1:26,969,834-26,975,477 | + | C2H1g08871 | CX1g003519 | LOC_Os01g52514 | Os01g0723500 | - | Detail |
| C1H1g03740 | 1:26,976,986-26,981,316 | + | C2H1g17638 | CX1g004209 | LOC_Os01g52530 | Os01g0723600 | - | Detail |
| C1H1g09315 | 1:26,983,980-26,987,890 | + | C2H1g22241 | CX1g004680 | LOC_Os01g52540 | Os01g0723700 | - | Detail |
| C1H1g17060 | 1:26,988,103-26,994,535 | - | C2H1g23039 | CX1g004575 | LOC_Os01g52550 | Os01g0723800 | - | Detail |
| C1H1g18463 | 1:27,012,831-27,022,129 | + | C2H1g05862 | CX1g004747 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| C1H1g09116 | 1:27,038,700-27,046,564 | + | C2H1g26023 | CX1g002347 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| C1H1g01881 | 1:27,047,370-27,050,594 | + | C2H1g19762 | CX1g003740 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| C1H1g28016 | 1:27,055,008-27,060,104 | + | C2H1g12468 | CX1g000922 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| C1H1g01009 | 1:27,060,442-27,061,041 | - | C2H1g25269 | CX1g004829 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| C1H1g26602 | 1:27,063,887-27,064,616 | - | C2H1g28455 | CX1g001737 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033880 | 4:21,720,363-21,724,166 | + | C1H4g02468 | C2H4g03976 | LOC_Os04g42570 | Os04g0504500 | - | Detail |
| CX4g034844 | 4:21,726,038-21,729,354 | + | C1H4g08801 | C2H4g26755 | LOC_Os04g42580 | Os04g0504600 | - | Detail |
| CX4g035367 | 4:21,729,877-21,731,095 | - | C1H4g08459 | C2H4g20270 | LOC_Os04g42590 | Os04g0504700 | - | Detail |
| CX4g034283 | 4:21,733,180-21,739,011 | - | C1H4g18953 | C2H4g27949 | LOC_Os04g42600 | Os04g0504800 | - | Detail |
| CX4g032589 | 4:21,743,818-21,744,033 | + | C1H4g20138 | - | - | - | - | Detail |
| CX4g035894 | 4:21,746,149-21,748,905 | + | C1H4g09949 | C2H4g13700 | LOC_Os04g42610 | Os04g0505000 | - | Detail |
| CX4g033549 | 4:21,753,807-21,755,168 | + | C1H4g26420 | C2H4g25893 | LOC_Os04g42620 | Os04g0505200 | - | Detail |
| CX4g032687 | 4:21,757,227-21,763,482 | - | C1H4g02661 | C2H4g01312 | LOC_Os04g42634 | Os04g0380800 | - | Detail |
| CX4g035920 | 4:21,765,375-21,765,590 | - | - | - | - | - | - | Detail |
| CX4g036118 | 4:21,768,452-21,770,125 | - | - | C2H4g26509 | LOC_Os04g42650 | Os04g0505400 | - | Detail |
| CX4g036362 | 4:21,790,186-21,791,730 | - | C1H4g22256 | C2H4g26448 | LOC_Os04g42670 | Os04g0505700 | - | Detail |
| CX4g034590 | 4:21,798,694-21,800,154 | - | C1H4g14124 | C2H4g18722 | LOC_Os04g42690 | Os04g0506000 | - | Detail |
| CX4g031779 | 4:21,801,444-21,804,922 | - | C1H4g29579 | C2H4g22704 | LOC_Os04g42700 | Os04g0506100 | - | Detail |
| CX4g035900 | 4:21,820,889-21,824,871 | - | C1H4g02105 | C2H4g25253 | LOC_Os04g42720 | Os04g0506300 | - | Detail |
| CX4g033421 | 4:21,827,216-21,827,686 | - | - | C2H4g16575 | - | Os04g0506500 | - | Detail |
| CX4g033680 | 4:21,828,282-21,829,607 | + | C1H4g17134 | C2H4g08397 | LOC_Os04g42740 | Os04g0506700 | SDRLK-29 | Detail |
| CX4g032453 | 4:21,832,555-21,833,781 | - | - | - | - | - | - | Detail |
| CX4g032341 | 4:21,845,011-21,848,726 | - | C1H4g22828 | C2H4g24051 | LOC_Os04g42770 | Os04g0506900 | - | Detail |
| CX4g032669 | 4:21,854,034-21,867,391 | - | C1H4g00682 | C2H4g08751 | LOC_Os04g42784 | Os04g0507000 | - | Detail |
| CX4g035355 | 4:21,868,421-21,869,850 | - | C1H4g13723 | C2H4g06679 | LOC_Os04g42800 | - | - | Detail |