| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03888 | 4:28,295,410-28,295,805 | - | C1H4g29756 | CX4g033466 | LOC_Os04g55170 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| C2H4g28358 | 4:28,299,164-28,310,153 | - | C1H4g08012 | CX4g036449 | LOC_Os04g55190 | Os04g0644675 | - | Detail |
| C2H4g15694 | 4:28,314,152-28,316,257 | + | C1H4g06360 | CX4g033425 | LOC_Os04g55200 | Os04g0644700 | - | Detail |
| C2H4g05660 | 4:28,317,215-28,322,007 | + | C1H4g02968 | CX4g032169 | LOC_Os04g55210 | Os04g0644800 | - | Detail |
| C2H4g12779 | 4:28,327,588-28,332,623 | + | C1H4g08695 | CX4g032248 | LOC_Os04g55220 | Os04g0644900 | - | Detail |
| C2H4g19510 | 4:28,335,294-28,348,459 | + | C1H4g06283 | CX4g033214 | LOC_Os04g55230 | Os04g0645100 | - | Detail |
| C2H4g14418 | 4:28,351,996-28,352,583 | - | C1H4g18694 | CX4g032908 | LOC_Os04g55240 | Os04g0645200 | - | Detail |
| C2H4g22066 | 4:28,355,865-28,356,620 | + | - | CX4g031778 | LOC_Os04g55250 | Os04g0645500 | - | Detail |
| C2H4g01093 | 4:28,356,757-28,360,600 | - | C1H4g06884 | CX4g036437 | LOC_Os04g55260 | Os04g0645600 | - | Detail |
| C2H4g27076 | 4:28,366,816-28,370,143 | - | C1H4g28592 | CX4g032085 | LOC_Os04g55280 | Os04g0646050 | - | Detail |
| C2H4g00324 | 4:28,370,940-28,372,339 | - | C1H4g12666 | CX4g031654 | LOC_Os04g55290 | Os04g0646100 | - | Detail |
| C2H4g28891 | 4:28,404,351-28,405,010 | - | C1H4g04933 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C2H4g25523 | 4:28,405,169-28,407,565 | - | C1H4g01013 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C2H4g00723 | 4:28,428,202-28,432,244 | - | C1H4g17955 | CX4g032705 | LOC_Os04g55410 | Os04g0647800 | - | Detail |
| C2H4g03628 | 4:28,435,119-28,438,284 | + | C1H4g25822 | CX4g034505 | LOC_Os04g55420 | Os04g0647900 | - | Detail |
| C2H4g20686 | 4:28,441,751-28,444,579 | + | C1H4g16013 | CX4g034215 | LOC_Os04g55440 | Os04g0648200 | - | Detail |
| C2H4g26419 | 4:28,449,270-28,454,054 | - | C1H4g25119 | CX4g031467 | LOC_Os04g55480 | Os04g0648500 | - | Detail |
| C2H4g12403 | 4:28,455,832-28,456,650 | + | - | CX4g034038 | LOC_Os04g55490 | Os04g0648600 | - | Detail |
| C2H4g12616 | 4:28,459,506-28,465,690 | + | C1H4g03048 | CX4g032703 | LOC_Os04g55500 | Os04g0648700 | - | Detail |
| C2H4g21483 | 4:28,474,766-28,480,256 | + | C1H4g02593 | CX4g033088 | LOC_Os04g55510 | Os04g0648800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034860 | 4:21,472,377-21,472,607 | + | C1H1g09261 | C2H8g15906 | LOC_Os09g25660 | Os04g0286500 | - | Detail |
| CX4g032632 | 4:21,476,846-21,478,961 | + | C1H4g24350 | C2H4g13494 | LOC_Os04g42130 | Os04g0499100 | - | Detail |
| CX4g031891 | 4:21,479,568-21,480,742 | - | C1H4g04057 | C2H4g25390 | LOC_Os04g42134 | Os04g0499200 | - | Detail |
| CX4g035111 | 4:21,482,466-21,488,083 | - | C1H4g00134 | C2H4g20172 | LOC_Os04g42140 | Os04g0499300 | RYMV1 | Detail |
| CX4g035013 | 4:21,490,915-21,491,553 | - | - | - | - | - | - | Detail |
| CX4g031677 | 4:21,492,873-21,494,129 | - | - | C2H4g01071 | LOC_Os04g41900 | Os04g0496300 | - | Detail |
| CX4g034287 | 4:21,513,336-21,513,593 | - | - | - | LOC_Os11g04894 | Os11g0146000 | - | Detail |
| CX4g035561 | 4:21,515,744-21,517,417 | + | C1H4g24364 | C2H4g02845 | LOC_Os04g42160 | - | - | Detail |
| CX4g035616 | 4:21,520,893-21,521,654 | - | C1H4g04561 | C2H4g09516 | LOC_Os04g42200 | Os04g0500200 | - | Detail |
| CX4g034798 | 4:21,522,540-21,523,204 | + | C1H4g07100 | C2H4g21155 | LOC_Os04g42210 | Os04g0500300 | - | Detail |
| CX4g032419 | 4:21,525,328-21,526,059 | + | C1H4g19980 | C2H4g14569 | LOC_Os04g42220 | Os04g0500400 | - | Detail |
| CX4g032000 | 4:21,526,557-21,527,111 | - | - | C2H4g30419 | LOC_Os04g42230 | - | - | Detail |
| CX4g033698 | 4:21,538,150-21,543,033 | + | C1H4g27904 | C2H4g14624 | LOC_Os04g42250 | Os04g0500700 | - | Detail |
| CX4g034952 | 4:21,547,554-21,550,619 | + | C1H4g03919 | C2H4g24343 | LOC_Os04g42260 | Os04g0500900 | - | Detail |
| CX4g034970 | 4:21,552,293-21,554,022 | - | C1H4g10006 | C2H4g19796 | LOC_Os04g42270 | Os04g0501000 | - | Detail |
| CX4g033035 | 4:21,554,719-21,558,062 | + | C1H4g23951 | C2H4g05530 | LOC_Os04g42280 | Os04g0501100 | - | Detail |
| CX4g036023 | 4:21,560,453-21,563,052 | + | C1H4g25280 | C2H4g16771 | LOC_Os04g42290 | Os04g0501200 | - | Detail |
| CX4g032772 | 4:21,572,931-21,573,476 | - | - | C2H4g22623 | - | - | - | Detail |
| CX4g032139 | 4:21,578,896-21,580,182 | - | - | C2H4g18693 | LOC_Os04g42310 | Os04g0501500 | - | Detail |
| CX4g034319 | 4:21,583,507-21,588,000 | - | - | C2H4g30574 | - | - | - | Detail |