| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02353 | 1:11,674,300-11,679,910 | + | C1H1g28713 | CX1g000663 | LOC_Os01g24060 | Os01g0343200 | - | Detail |
| C2H1g26949 | 1:11,685,554-11,687,349 | + | C1H1g18384 | CX1g001080 | LOC_Os01g24070 | Os01g0343300 | OsGATA8 | Detail |
| C2H1g05738 | 1:11,696,982-11,699,421 | - | C1H1g01015 | CX1g003896 | LOC_Os01g24090 | Os01g0343500 | - | Detail |
| C2H1g07085 | 1:11,827,376-11,830,076 | + | - | - | LOC_Os01g27449 | Os01g0372100 | - | Detail |
| C2H1g16748 | 1:11,899,919-11,901,719 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g05112 | 1:11,937,505-11,943,811 | + | C1H1g27449 | CX1g005895 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g30571 | 1:11,948,445-11,952,134 | - | C1H1g01597 | CX1g001516 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H1g15253 | 1:11,954,093-11,955,767 | - | - | - | - | - | - | Detail |
| C2H1g16729 | 1:11,956,738-11,959,165 | - | - | - | - | - | - | Detail |
| C2H1g03429 | 1:12,036,103-12,038,238 | + | C1H1g12059 | CX1g004622 | LOC_Os01g26980 | Os01g0738500 | - | Detail |
| C2H1g13415 | 1:12,067,581-12,069,632 | + | C1H1g13768 | CX1g001811 | - | Os01g0527900 | - | Detail |
| C2H1g07465 | 1:12,086,685-12,087,860 | + | C1H1g21970 | CX1g002117 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| C2H1g25406 | 1:12,110,695-12,115,118 | + | C1H1g27382 | CX1g002994 | LOC_Os01g24470 | Os01g0347000 | - | Detail |
| C2H1g02246 | 1:12,115,613-12,120,143 | - | C1H1g08071 | CX1g000129 | LOC_Os01g24480 | Os01g0347100 | - | Detail |
| C2H1g19331 | 1:12,125,101-12,126,796 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g13817 | 1:12,132,010-12,134,037 | + | C1H1g27449 | CX1g006871 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g12753 | 1:12,181,907-12,186,318 | - | C1H1g04145 | CX1g004547 | - | Os01g0852650 | - | Detail |
| C2H1g06141 | 1:12,187,581-12,188,746 | - | C1H1g09482 | CX1g001042 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| C2H1g29017 | 1:12,191,860-12,192,978 | + | C1H1g19481 | CX1g002830 | LOC_Os01g24560 | Os01g0347600 | - | Detail |
| C2H1g00502 | 1:12,208,552-12,209,729 | + | C1H1g19455 | CX1g004946 | LOC_Os01g24550 | Os01g0348000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035949 | 4:21,376,464-21,382,072 | - | C1H4g24120 | C2H4g02441 | LOC_Os04g41950 | Os04g0496800 | - | Detail |
| CX4g035104 | 4:21,383,721-21,383,873 | + | - | - | - | - | - | Detail |
| CX4g032219 | 4:21,385,037-21,386,393 | - | C1H4g16028 | C2H4g29152 | LOC_Os04g41960 | Os04g0497000 | - | Detail |
| CX4g033375 | 4:21,389,581-21,392,927 | - | C1H4g00212 | C2H4g15097 | LOC_Os04g41970 | Os04g0497200 | OsGLU3 | Detail |
| CX4g036664 | 4:21,400,192-21,400,577 | + | C1H4g06619 | C2H4g03902 | LOC_Os04g41980 | Os04g0497300 | - | Detail |
| CX4g034539 | 4:21,401,084-21,402,239 | - | C1H4g16966 | C2H4g24147 | LOC_Os04g41990 | Os04g0497350 | OsATG10a | Detail |
| CX4g034309 | 4:21,407,593-21,410,678 | - | C1H4g21848 | C2H4g16343 | LOC_Os04g42000 | Os04g0497400 | - | Detail |
| CX4g031377 | 4:21,411,745-21,415,393 | - | C1H4g01341 | C2H4g27408 | LOC_Os04g42010 | Os04g0497600 | OsLa1 | Detail |
| CX4g031426 | 4:21,418,713-21,419,820 | + | C1H4g30019 | C2H4g04925 | LOC_Os04g42020 | Os04g0497700 | - | Detail |
| CX4g034966 | 4:21,420,900-21,422,789 | + | C1H4g01078 | C2H4g17364 | LOC_Os04g42030 | Os04g0497900 | SWL1 | Detail |
| CX4g035157 | 4:21,424,901-21,426,835 | + | C1H4g01769 | C2H4g10025 | LOC_Os04g42040 | Os04g0498000 | - | Detail |
| CX4g033954 | 4:21,437,182-21,437,488 | - | C1H4g22399 | C2H4g24359 | - | Os04g0498200 | - | Detail |
| CX4g035149 | 4:21,439,080-21,441,062 | - | C1H4g26119 | C2H4g24180 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| CX4g034831 | 4:21,444,500-21,446,114 | + | C1H4g24329 | C2H4g04320 | LOC_Os04g42090 | Os04g0498600 | - | Detail |
| CX4g035609 | 4:21,449,171-21,451,794 | - | C1H4g07127 | C2H4g02540 | LOC_Os04g42100 | Os04g0498700 | - | Detail |
| CX4g036667 | 4:21,456,210-21,459,880 | + | C1H4g28042 | C2H4g27959 | LOC_Os04g42110 | Os04g0498800 | - | Detail |
| CX4g033443 | 4:21,460,624-21,462,676 | - | C1H4g30393 | C2H4g04345 | LOC_Os04g42120 | Os04g0498900 | - | Detail |
| CX4g033902 | 4:21,464,458-21,464,607 | - | - | - | - | - | - | Detail |
| CX4g035569 | 4:21,466,050-21,468,367 | - | - | C2H4g17942 | - | Os04g0152400 | - | Detail |
| CX4g035181 | 4:21,471,917-21,472,177 | - | - | - | - | Os09g0424850 | - | Detail |