| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02644 | 5:16,248,352-16,248,764 | + | C2H5g17544 | - | LOC_Os05g33700 | Os05g0407100 | - | Detail |
| C1H5g06235 | 5:16,251,846-16,259,936 | - | C2H5g09572 | CX5g039305 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| C1H5g07655 | 5:16,273,502-16,276,522 | + | C2H5g14010 | CX5g040161 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| C1H5g16377 | 5:16,292,543-16,298,303 | - | C2H5g30500 | CX5g040515 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| C1H5g29208 | 5:16,299,479-16,300,013 | - | - | - | - | - | - | Detail |
| C1H5g18086 | 5:16,310,502-16,318,701 | + | C2H5g11444 | CX5g038802 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| C1H5g22231 | 5:16,320,596-16,323,884 | - | C2H5g22366 | CX5g040901 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| C1H5g07753 | 5:16,338,372-16,339,250 | - | C2H5g14510 | CX5g037819 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| C1H5g01736 | 5:16,341,816-16,342,366 | - | C2H5g20401 | CX5g037932 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| C1H5g28806 | 5:16,342,750-16,348,841 | - | C2H5g21665 | CX5g039038 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| C1H5g13458 | 5:16,356,139-16,360,666 | - | C2H5g22578 | CX5g040687 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| C1H5g23907 | 5:16,367,482-16,368,533 | + | C2H5g22810 | CX5g036877 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| C1H5g25708 | 5:16,372,134-16,373,574 | + | C2H5g14027 | CX5g038152 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| C1H5g10361 | 5:16,373,908-16,378,104 | + | C2H5g06598 | CX5g038053 | LOC_Os05g33880 | Os05g0409300 | - | Detail |
| C1H5g20921 | 5:16,379,238-16,384,284 | + | C2H5g24418 | CX5g040809 | LOC_Os05g33890 | Os05g0409400 | MAP65-5 | Detail |
| C1H5g09074 | 5:16,388,271-16,390,229 | - | C2H5g11844 | CX5g041144 | LOC_Os05g33900 | Os05g0409500 | - | Detail |
| C1H5g30333 | 5:16,414,244-16,415,575 | + | C2H5g23232 | CX5g037035 | LOC_Os05g33920 | Os05g0409800 | - | Detail |
| C1H5g08005 | 5:16,425,658-16,426,710 | + | C2H5g30472 | CX5g037287 | LOC_Os05g33940 | Os05g0410200 | - | Detail |
| C1H5g00588 | 5:16,435,503-16,440,524 | - | C2H5g17136 | CX5g040712 | LOC_Os05g33960 | Os05g0410500 | - | Detail |
| C1H5g18824 | 5:16,453,084-16,455,295 | + | C2H5g01676 | CX5g037111 | LOC_Os05g33960 | Os05g0410800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035949 | 4:21,376,464-21,382,072 | - | C1H4g24120 | C2H4g02441 | LOC_Os04g41950 | Os04g0496800 | - | Detail |
| CX4g035104 | 4:21,383,721-21,383,873 | + | - | - | - | - | - | Detail |
| CX4g032219 | 4:21,385,037-21,386,393 | - | C1H4g16028 | C2H4g29152 | LOC_Os04g41960 | Os04g0497000 | - | Detail |
| CX4g033375 | 4:21,389,581-21,392,927 | - | C1H4g00212 | C2H4g15097 | LOC_Os04g41970 | Os04g0497200 | OsGLU3 | Detail |
| CX4g036664 | 4:21,400,192-21,400,577 | + | C1H4g06619 | C2H4g03902 | LOC_Os04g41980 | Os04g0497300 | - | Detail |
| CX4g034539 | 4:21,401,084-21,402,239 | - | C1H4g16966 | C2H4g24147 | LOC_Os04g41990 | Os04g0497350 | OsATG10a | Detail |
| CX4g034309 | 4:21,407,593-21,410,678 | - | C1H4g21848 | C2H4g16343 | LOC_Os04g42000 | Os04g0497400 | - | Detail |
| CX4g031377 | 4:21,411,745-21,415,393 | - | C1H4g01341 | C2H4g27408 | LOC_Os04g42010 | Os04g0497600 | OsLa1 | Detail |
| CX4g031426 | 4:21,418,713-21,419,820 | + | C1H4g30019 | C2H4g04925 | LOC_Os04g42020 | Os04g0497700 | - | Detail |
| CX4g034966 | 4:21,420,900-21,422,789 | + | C1H4g01078 | C2H4g17364 | LOC_Os04g42030 | Os04g0497900 | SWL1 | Detail |
| CX4g035157 | 4:21,424,901-21,426,835 | + | C1H4g01769 | C2H4g10025 | LOC_Os04g42040 | Os04g0498000 | - | Detail |
| CX4g033954 | 4:21,437,182-21,437,488 | - | C1H4g22399 | C2H4g24359 | - | Os04g0498200 | - | Detail |
| CX4g035149 | 4:21,439,080-21,441,062 | - | C1H4g26119 | C2H4g24180 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| CX4g034831 | 4:21,444,500-21,446,114 | + | C1H4g24329 | C2H4g04320 | LOC_Os04g42090 | Os04g0498600 | - | Detail |
| CX4g035609 | 4:21,449,171-21,451,794 | - | C1H4g07127 | C2H4g02540 | LOC_Os04g42100 | Os04g0498700 | - | Detail |
| CX4g036667 | 4:21,456,210-21,459,880 | + | C1H4g28042 | C2H4g27959 | LOC_Os04g42110 | Os04g0498800 | - | Detail |
| CX4g033443 | 4:21,460,624-21,462,676 | - | C1H4g30393 | C2H4g04345 | LOC_Os04g42120 | Os04g0498900 | - | Detail |
| CX4g033902 | 4:21,464,458-21,464,607 | - | - | - | - | - | - | Detail |
| CX4g035569 | 4:21,466,050-21,468,367 | - | - | C2H4g17942 | - | Os04g0152400 | - | Detail |
| CX4g035181 | 4:21,471,917-21,472,177 | - | - | - | - | Os09g0424850 | - | Detail |