| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20320 | 4:4,580,684-4,595,119 | - | C1H4g19750 | CX4g036116 | - | Os04g0177600 | - | Detail |
| C2H4g06763 | 4:4,603,488-4,609,315 | + | C1H4g08248 | CX4g034737 | LOC_Os04g10060 | Os04g0179700 | OsKS4, OsKSL4, OsDTS2, OsKSL1 | Detail |
| C2H4g26362 | 4:4,610,311-4,613,778 | + | - | - | - | - | - | Detail |
| C2H4g10076 | 4:4,631,228-4,632,183 | + | C1H4g01524 | CX4g035289 | LOC_Os04g10010 | Os04g0179200 | - | Detail |
| C2H4g09020 | 4:4,636,815-4,638,002 | + | C1H4g30336 | CX4g033846 | LOC_Os04g10000 | Os04g0179100 | - | Detail |
| C2H4g20823 | 4:4,651,384-4,656,607 | - | C1H4g10301 | CX4g033652 | LOC_Os04g11850 | Os04g0206200 | - | Detail |
| C2H4g20465 | 4:4,684,456-4,684,847 | - | C1H3g15946 | CX4g035261 | - | - | - | Detail |
| C2H4g09237 | 4:4,691,216-4,693,185 | + | C1H4g28574 | CX4g036126 | LOC_Os04g09920 | Os04g0178400 | CYP99A3 | Detail |
| C2H4g23937 | 4:4,702,491-4,703,137 | + | - | CX4g036600 | LOC_Os10g11240 | Os08g0271600 | - | Detail |
| C2H4g23853 | 4:4,705,215-4,709,270 | - | C1H4g09839 | CX4g032774 | LOC_Os04g09900 | Os04g0178300 | OsCPS4, Os-CPS4, OsCyc1, OsCPSsyn | Detail |
| C2H4g26728 | 4:4,710,898-4,711,756 | - | C1H4g12052 | CX4g032774 | LOC_Os04g09900 | Os04g0611800 | OsKSL2 | Detail |
| C2H4g06078 | 4:4,732,665-4,734,362 | + | C1H4g04065 | CX4g034919 | LOC_Os04g10160 | Os04g0180400 | - | Detail |
| C2H4g21850 | 4:4,759,078-4,761,519 | - | C1H4g03949 | - | LOC_Os04g10210 | - | - | Detail |
| C2H4g14385 | 4:4,767,542-4,770,581 | - | C1H4g10325 | CX4g036149 | LOC_Os04g10240 | Os04g0181100 | - | Detail |
| C2H4g14846 | 4:4,779,345-4,782,119 | - | C1H4g30056 | CX4g035099 | LOC_Os04g10260 | Os04g0181300 | - | Detail |
| C2H4g02690 | 4:4,784,623-4,786,141 | + | C1H4g22965 | CX4g035182 | LOC_Os04g10350 | Os04g0182200 | - | Detail |
| C2H4g06301 | 4:4,797,896-4,798,687 | + | - | - | - | - | - | Detail |
| C2H4g27360 | 4:4,806,675-4,808,996 | + | C1H4g24802 | CX4g035182 | LOC_Os04g10350 | Os04g0182200 | - | Detail |
| C2H4g25006 | 4:4,828,000-4,849,200 | + | C1H4g12559 | CX4g032156 | LOC_Os04g10380 | Os04g0182650 | - | Detail |
| C2H4g08700 | 4:4,856,672-4,859,865 | - | C1H4g07822 | CX4g034981 | LOC_Os04g10400 | Os04g0182800 | ETFβ | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032501 | 4:20,920,030-20,924,057 | + | C1H4g25578 | C2H4g02391 | LOC_Os04g41020 | Os04g0487100 | - | Detail |
| CX4g035927 | 4:20,926,971-20,928,525 | + | C1H4g27067 | C2H4g27624 | LOC_Os04g41690 | - | - | Detail |
| CX4g033290 | 4:20,931,506-20,932,132 | - | - | - | - | - | - | Detail |
| CX4g035971 | 4:20,934,755-20,936,632 | + | C1H4g28199 | C2H4g21017 | LOC_Os04g41030 | Os04g0487200 | OsSLA1 | Detail |
| CX4g034683 | 4:20,939,421-20,942,046 | - | C1H4g30001 | C2H4g24694 | LOC_Os04g41040 | Os04g0487300 | - | Detail |
| CX4g034700 | 4:20,950,519-20,950,890 | + | - | - | LOC_Os04g53030 | - | - | Detail |
| CX4g031685 | 4:20,958,132-20,959,274 | + | C1H4g02416 | C2H4g00904 | LOC_Os04g41060 | Os04g0487550 | - | Detail |
| CX4g034743 | 4:20,970,359-20,973,443 | + | C1H4g02988 | C2H4g04984 | LOC_Os04g41100 | Os04g0488000 | - | Detail |
| CX4g033010 | 4:20,975,826-20,976,128 | + | - | - | - | - | - | Detail |
| CX4g034016 | 4:20,978,618-20,984,759 | + | C1H4g01615 | C2H4g02252 | LOC_Os04g41110 | Os04g0488100 | OsRad21-2 | Detail |
| CX4g033501 | 4:20,988,235-20,989,965 | + | C1H4g12183 | C2H4g00501 | LOC_Os04g41120 | Os04g0488200 | - | Detail |
| CX4g036330 | 4:20,991,612-20,992,590 | - | C1H4g05585 | C2H4g07459 | LOC_Os04g41130 | Os04g0488400 | - | Detail |
| CX4g036114 | 4:20,995,125-20,995,442 | + | - | - | - | Os04g0488300 | - | Detail |
| CX4g033446 | 4:20,998,358-21,001,423 | - | C1H4g05728 | C2H4g11043 | LOC_Os04g41140 | Os04g0488500 | - | Detail |
| CX4g035978 | 4:21,003,259-21,003,726 | + | C1H4g04302 | C2H4g00004 | LOC_Os04g41150 | Os04g0488600 | - | Detail |
| CX4g032596 | 4:21,012,070-21,012,240 | - | - | - | - | - | - | Detail |
| CX4g034396 | 4:21,019,530-21,021,024 | - | C1H4g21499 | C2H4g20138 | LOC_Os04g41160 | Os04g0488700 | - | Detail |
| CX4g033270 | 4:21,031,517-21,039,900 | - | C1H4g17621 | C2H4g16331 | LOC_Os04g41200 | Os04g0489100 | - | Detail |
| CX4g036668 | 4:21,043,003-21,043,311 | - | C1H4g14434 | C2H4g30667 | - | Os04g0489200 | - | Detail |
| CX4g034720 | 4:21,048,457-21,057,563 | + | C1H4g13969 | C2H4g29111 | LOC_Os04g41229 | Os04g0489600 | OsbHLH111, OsSGI1, HBP1 | Detail |