| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g11107 | 5:11,284,076-11,287,843 | - | C1H5g18969 | CX5g039364 | LOC_Os05g23610 | Os05g0301600 | OsINH2 | Detail |
| C2H5g30488 | 5:11,299,780-11,304,802 | - | C1H5g13833 | CX5g038383 | LOC_Os05g23600 | Os05g0301500 | - | Detail |
| C2H5g15419 | 5:11,337,068-11,344,288 | - | C1H5g25741 | CX5g039737 | LOC_Os05g23530 | Os05g0300700 | - | Detail |
| C2H5g00677 | 5:11,356,557-11,357,506 | + | C1H5g08150 | CX5g038824 | - | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C2H5g24108 | 5:11,359,892-11,360,796 | + | - | - | - | - | - | Detail |
| C2H5g01000 | 5:11,364,368-11,365,002 | - | - | CX5g039051 | - | - | - | Detail |
| C2H5g13191 | 5:11,386,359-11,388,794 | + | C1H5g23960 | CX5g037400 | LOC_Os05g23470 | Os05g0299700 | - | Detail |
| C2H5g12441 | 5:11,389,339-11,390,546 | - | C1H5g10338 | CX5g039100 | LOC_Os05g23440 | Os05g0299500 | - | Detail |
| C2H5g25475 | 5:11,401,218-11,401,442 | - | - | - | - | - | - | Detail |
| C2H5g29124 | 5:11,401,644-11,403,214 | + | C1H5g16907 | CX5g041087 | LOC_Os05g23450 | Os05g0125600 | - | Detail |
| C2H5g22808 | 5:11,405,918-11,413,365 | - | C1H5g10724 | CX5g039100 | LOC_Os05g23440 | Os05g0299500 | - | Detail |
| C2H5g10787 | 5:11,423,646-11,429,535 | + | C1H5g22140 | CX5g037270 | LOC_Os05g23430 | Os05g0299300 | - | Detail |
| C2H5g08398 | 5:11,431,276-11,436,314 | + | C1H5g26259 | CX5g037770 | LOC_Os05g23420 | Os05g0299200 | - | Detail |
| C2H5g16507 | 5:11,447,206-11,449,537 | + | C1H5g16206 | CX5g039540 | LOC_Os05g23840 | Os05g0304100 | - | Detail |
| C2H5g25548 | 5:11,453,620-11,458,632 | + | C1H5g08335 | CX5g038810 | LOC_Os05g23860 | Os05g0304400 | OsGDI2 | Detail |
| C2H5g22505 | 5:11,465,467-11,471,525 | + | C1H5g06395 | CX5g039261 | LOC_Os05g23880 | Os05g0304600 | - | Detail |
| C2H5g01064 | 5:11,496,109-11,503,222 | - | C1H5g01632 | CX5g037017 | LOC_Os05g23924 | Os05g0304900 | - | Detail |
| C2H5g30014 | 5:11,515,970-11,525,571 | + | C1H5g22159 | CX5g038283 | LOC_Os05g23940 | Os05g0305100 | - | Detail |
| C2H5g05339 | 5:11,601,443-11,605,240 | + | C1H5g28207 | CX5g037690 | LOC_Os05g23990 | Os05g0305600 | - | Detail |
| C2H5g07432 | 5:11,605,893-11,612,123 | - | C1H5g16715 | CX5g037290 | LOC_Os05g24000 | Os05g0305700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033470 | 4:20,682,653-20,683,741 | - | C1H4g26467 | C2H4g14800 | LOC_Os04g40540 | Os04g0481400 | PIMT2, OsPIMT2 | Detail |
| CX4g036535 | 4:20,685,735-20,686,035 | - | C1H4g30891 | - | LOC_Os04g40550 | Os04g0481500 | - | Detail |
| CX4g035907 | 4:20,695,688-20,697,313 | + | - | - | - | Os04g0481550 | - | Detail |
| CX4g032841 | 4:20,698,736-20,698,933 | + | - | - | - | - | - | Detail |
| CX4g036548 | 4:20,704,939-20,709,065 | + | C1H4g04703 | C2H4g19764 | LOC_Os04g40570 | Os04g0481700 | - | Detail |
| CX4g034428 | 4:20,709,442-20,710,494 | - | - | C2H4g21164 | LOC_Os04g40580 | Os04g0481800 | - | Detail |
| CX4g032875 | 4:20,712,076-20,713,113 | - | - | C2H4g02557 | LOC_Os04g40590 | Os04g0481900 | - | Detail |
| CX4g033202 | 4:20,714,013-20,715,926 | - | C1H4g19577 | C2H4g14421 | LOC_Os04g40600 | Os04g0482000 | - | Detail |
| CX4g035067 | 4:20,716,816-20,718,510 | - | C1H4g05922 | C2H4g14421 | LOC_Os04g40620 | Os04g0482100 | - | Detail |
| CX4g032530 | 4:20,720,146-20,720,892 | - | - | C2H4g11308 | LOC_Os08g05140 | - | - | Detail |
| CX4g036562 | 4:20,731,403-20,733,081 | + | C1H4g16338 | C2H4g11201 | LOC_Os04g40630 | Os04g0482300 | - | Detail |
| CX4g034569 | 4:20,737,905-20,738,078 | + | - | - | - | - | - | Detail |
| CX4g036028 | 4:20,739,049-20,739,374 | - | C1H4g12073 | C2H4g13783 | LOC_Os04g40640 | Os04g0482600 | - | Detail |
| CX4g036343 | 4:20,743,093-20,745,469 | - | C1H4g31403 | C2H4g17042 | LOC_Os04g40650 | Os04g0482700 | - | Detail |
| CX4g032655 | 4:20,746,659-20,750,424 | - | C1H4g18067 | C2H4g09234 | LOC_Os04g40660 | Os04g0482800 | - | Detail |
| CX4g032113 | 4:20,751,915-20,757,013 | - | C1H4g04900 | C2H4g06345 | LOC_Os04g40670 | Os04g0482900 | - | Detail |
| CX4g031854 | 4:20,757,801-20,758,037 | + | - | - | - | Os04g0482950 | - | Detail |
| CX4g035699 | 4:20,760,548-20,762,090 | + | C1H4g26441 | C2H4g21173 | LOC_Os04g40680 | Os04g0483000 | - | Detail |
| CX4g036074 | 4:20,772,966-20,776,956 | + | C1H4g10284 | C2H4g26991 | LOC_Os04g40700 | Os04g0483200 | - | Detail |
| CX4g035331 | 4:20,777,661-20,783,801 | - | C1H4g11147 | C2H4g13170 | LOC_Os04g40720 | Os04g0483400 | OsSUBSrP1 | Detail |