| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g29145 | 6:23,706,166-23,709,605 | + | C1H6g30289 | CX6g043417 | LOC_Os06g44970 | Os06g0660200 | OsPIN2, PIN2 | Detail |
| C2H6g26561 | 6:23,723,911-23,725,981 | + | C1H6g10775 | CX6g042267 | LOC_Os06g45000 | Os06g0660700 | - | Detail |
| C2H6g03279 | 6:23,729,251-23,735,932 | + | C1H6g30897 | CX6g042767 | LOC_Os06g45020 | Os06g0660800 | - | Detail |
| C2H6g19984 | 6:23,746,714-23,747,683 | - | C1H6g04237 | CX6g043377 | - | - | - | Detail |
| C2H6g15814 | 6:23,749,994-23,753,615 | + | C1H6g27462 | CX6g044438 | LOC_Os06g45050 | Os06g0661400 | - | Detail |
| C2H6g03533 | 6:23,754,072-23,755,023 | - | C1H6g20860 | CX6g043401 | LOC_Os06g45060 | Os06g0661500 | - | Detail |
| C2H6g07549 | 6:23,757,720-23,762,154 | - | C1H6g10184 | CX6g042847 | LOC_Os06g45080 | Os06g0661700 | - | Detail |
| C2H6g01023 | 6:23,765,678-23,766,594 | + | C1H6g11026 | CX6g044489 | LOC_Os06g45090 | Os06g0661766 | - | Detail |
| C2H6g04346 | 6:23,767,921-23,768,905 | - | C1H6g25522 | CX6g042632 | LOC_Os06g45100 | Os06g0661800 | - | Detail |
| C2H6g03075 | 6:23,769,309-23,770,521 | - | C1H6g25522 | CX6g042632 | LOC_Os06g45100 | Os06g0661800 | - | Detail |
| C2H6g29640 | 6:23,771,435-23,776,537 | - | C1H6g23408 | CX6g045877 | LOC_Os06g45110 | Os06g0661900 | - | Detail |
| C2H6g27870 | 6:23,777,747-23,784,336 | - | C1H6g23397 | CX6g045100 | LOC_Os06g45120 | Os06g0662000 | PLS1, OsVHA-A, VHAA1, VHA-A1, OsPLS1, OsPLS1/VHA-A1 | Detail |
| C2H6g22069 | 6:23,790,852-23,792,411 | - | C1H11g18273 | - | - | - | - | Detail |
| C2H6g29043 | 6:23,794,036-23,796,026 | - | C1H6g11972 | CX6g043798 | LOC_Os06g45140 | Os06g0662200 | OsbZIP52, OsbZIP52/RISBZ5, RISBZ5 | Detail |
| C2H6g07889 | 6:23,827,399-23,831,478 | - | C1H6g07836 | CX6g043246 | LOC_Os06g45250 | Os06g0663100 | - | Detail |
| C2H6g25016 | 6:23,832,265-23,837,611 | - | C1H6g25311 | CX6g043895 | LOC_Os06g45280 | Os06g0663200 | - | Detail |
| C2H6g04522 | 6:23,852,131-23,854,533 | + | C1H6g07255 | CX6g044109 | LOC_Os06g45300 | Os06g0663400 | - | Detail |
| C2H6g09171 | 6:23,855,710-23,859,081 | - | C1H6g04964 | CX6g042273 | LOC_Os06g45310 | Os06g0663500 | - | Detail |
| C2H6g13796 | 6:23,865,676-23,867,856 | - | C1H6g11988 | CX6g041502 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| C2H6g08478 | 6:23,869,531-23,870,802 | - | C1H6g24851 | CX6g045945 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031592 | 4:20,453,016-20,455,427 | + | C1H4g27571 | C2H4g15875 | LOC_Os04g39910 | Os04g0475100 | SDRLK-61 | Detail |
| CX4g034833 | 4:20,459,326-20,461,734 | + | C1H4g19181 | C2H4g18216 | LOC_Os04g39930 | Os04g0475200 | SDRLK-62 | Detail |
| CX4g035822 | 4:20,467,317-20,467,847 | - | C1H4g16959 | C2H4g17863 | LOC_Os04g39950 | Os04g0475300 | - | Detail |
| CX4g035952 | 4:20,468,740-20,469,591 | + | - | C2H4g17299 | LOC_Os04g39960 | Os04g0475400 | - | Detail |
| CX4g033449 | 4:20,470,454-20,471,689 | - | C1H4g29172 | C2H4g05329 | LOC_Os04g39970 | Os04g0475500 | OsV4 | Detail |
| CX4g034856 | 4:20,472,895-20,474,176 | - | C1H4g28080 | C2H4g06421 | LOC_Os04g39980 | Os04g0475600 | DAO | Detail |
| CX4g033390 | 4:20,488,382-20,490,753 | + | C1H4g09528 | C2H4g03255 | LOC_Os04g40030 | Os04g0476000 | - | Detail |
| CX4g033811 | 4:20,491,820-20,497,906 | - | C1H4g27545 | C2H4g11644 | LOC_Os04g40040 | Os04g0476100 | - | Detail |
| CX4g032761 | 4:20,503,865-20,504,017 | + | - | - | - | - | - | Detail |
| CX4g033662 | 4:20,506,571-20,515,556 | + | C1H4g20165 | C2H4g01499 | LOC_Os04g40060 | Os04g0476500 | - | Detail |
| CX4g034928 | 4:20,517,656-20,524,166 | + | C1H4g28689 | C2H4g08434 | LOC_Os04g40070 | Os04g0476600 | - | Detail |
| CX4g036402 | 4:20,525,561-20,528,466 | + | C1H4g22382 | C2H4g27838 | LOC_Os04g40080 | Os04g0476700 | OsIRL3 | Detail |
| CX4g031992 | 4:20,529,425-20,533,479 | - | C1H4g14627 | C2H4g01330 | LOC_Os04g40090 | Os04g0476800 | OsNBR1 | Detail |
| CX4g034194 | 4:20,538,551-20,540,722 | + | C1H4g19548 | C2H4g29662 | LOC_Os04g40100 | Os04g0477000 | - | Detail |
| CX4g033655 | 4:20,544,022-20,544,510 | - | C1H4g16625 | C2H4g02766 | LOC_Os04g40120 | Os04g0477100 | - | Detail |
| CX4g031850 | 4:20,545,811-20,551,631 | - | C1H4g22165 | C2H4g28888 | LOC_Os04g40130 | Os04g0477200 | - | Detail |
| CX4g035932 | 4:20,556,086-20,558,608 | - | C1H4g04341 | C2H4g16963 | LOC_Os04g40150 | Os04g0477500 | - | Detail |
| CX4g032211 | 4:20,569,753-20,570,175 | + | C1H4g30761 | C2H4g03853 | LOC_Os04g40180 | Os04g0477900 | - | Detail |
| CX4g035771 | 4:20,576,683-20,580,971 | + | C1H4g19712 | C2H4g11207 | LOC_Os04g40290 | Os04g0479000 | CRC1 | Detail |
| CX4g036544 | 4:20,581,685-20,583,447 | - | C1H4g01004 | C2H4g19162 | LOC_Os04g40300 | Os04g0479100 | - | Detail |