| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27418 | 1:17,413,631-17,420,934 | + | C2H1g21312 | CX1g005208 | LOC_Os08g09860 | - | - | Detail |
| C1H1g28314 | 1:17,443,733-17,444,303 | + | C2H1g17187 | CX1g003392 | LOC_Os01g33670 | Os01g0520500 | - | Detail |
| C1H1g02683 | 1:17,445,295-17,450,504 | - | C2H1g08242 | CX1g006219 | LOC_Os01g33684 | Os01g0520600 | - | Detail |
| C1H1g27816 | 1:17,476,223-17,477,466 | + | - | CX1g001522 | LOC_Os01g33762 | Os04g0228300 | - | Detail |
| C1H1g04217 | 1:17,498,928-17,506,747 | + | C2H1g00800 | CX1g002325 | LOC_Os01g33784 | Os01g0521400 | - | Detail |
| C1H1g30357 | 1:17,510,328-17,520,815 | + | C2H1g26145 | CX1g001131 | LOC_Os01g33800 | Os01g0521500 | - | Detail |
| C1H1g25202 | 1:17,537,078-17,538,135 | + | C2H1g21205 | CX1g005107 | LOC_Os01g33910 | Os01g0522100 | - | Detail |
| C1H1g08450 | 1:17,556,024-17,559,721 | + | C2H1g18568 | CX1g005107 | LOC_Os01g33930 | Os01g0522950 | - | Detail |
| C1H1g10941 | 1:17,562,380-17,563,337 | + | C2H1g11782 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C1H1g21896 | 1:17,564,801-17,565,783 | + | C2H1g11782 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C1H1g09014 | 1:17,573,170-17,581,097 | + | C2H1g13197 | CX1g005107 | LOC_Os01g34000 | Os01g0524100 | ESA1 | Detail |
| C1H1g03031 | 1:17,609,485-17,611,145 | + | C2H1g22021 | CX1g000293 | LOC_Os01g34060 | Os01g0863300 | - | Detail |
| C1H1g05337 | 1:17,624,574-17,635,162 | + | C2H1g01344 | CX1g003083 | LOC_Os01g34080 | Os01g0524700 | - | Detail |
| C1H1g08661 | 1:17,704,268-17,705,104 | + | C2H1g28979 | - | - | - | - | Detail |
| C1H1g01010 | 1:17,706,879-17,709,624 | + | C2H1g17057 | CX1g002923 | LOC_Os01g34190 | Os01g0526100 | - | Detail |
| C1H1g10979 | 1:17,710,839-17,714,130 | + | C2H1g19688 | CX1g003716 | LOC_Os01g34200 | Os01g0526200 | - | Detail |
| C1H1g28687 | 1:17,745,595-17,761,416 | + | C2H1g06550 | CX1g006793 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| C1H1g03628 | 1:17,762,560-17,767,791 | - | C2H1g06422 | CX1g000241 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| C1H1g18093 | 1:17,772,289-17,777,173 | - | C2H1g29503 | CX1g004192 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| C1H1g30321 | 1:17,779,715-17,791,385 | + | C2H1g02847 | CX1g007113 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031592 | 4:20,453,016-20,455,427 | + | C1H4g27571 | C2H4g15875 | LOC_Os04g39910 | Os04g0475100 | SDRLK-61 | Detail |
| CX4g034833 | 4:20,459,326-20,461,734 | + | C1H4g19181 | C2H4g18216 | LOC_Os04g39930 | Os04g0475200 | SDRLK-62 | Detail |
| CX4g035822 | 4:20,467,317-20,467,847 | - | C1H4g16959 | C2H4g17863 | LOC_Os04g39950 | Os04g0475300 | - | Detail |
| CX4g035952 | 4:20,468,740-20,469,591 | + | - | C2H4g17299 | LOC_Os04g39960 | Os04g0475400 | - | Detail |
| CX4g033449 | 4:20,470,454-20,471,689 | - | C1H4g29172 | C2H4g05329 | LOC_Os04g39970 | Os04g0475500 | OsV4 | Detail |
| CX4g034856 | 4:20,472,895-20,474,176 | - | C1H4g28080 | C2H4g06421 | LOC_Os04g39980 | Os04g0475600 | DAO | Detail |
| CX4g033390 | 4:20,488,382-20,490,753 | + | C1H4g09528 | C2H4g03255 | LOC_Os04g40030 | Os04g0476000 | - | Detail |
| CX4g033811 | 4:20,491,820-20,497,906 | - | C1H4g27545 | C2H4g11644 | LOC_Os04g40040 | Os04g0476100 | - | Detail |
| CX4g032761 | 4:20,503,865-20,504,017 | + | - | - | - | - | - | Detail |
| CX4g033662 | 4:20,506,571-20,515,556 | + | C1H4g20165 | C2H4g01499 | LOC_Os04g40060 | Os04g0476500 | - | Detail |
| CX4g034928 | 4:20,517,656-20,524,166 | + | C1H4g28689 | C2H4g08434 | LOC_Os04g40070 | Os04g0476600 | - | Detail |
| CX4g036402 | 4:20,525,561-20,528,466 | + | C1H4g22382 | C2H4g27838 | LOC_Os04g40080 | Os04g0476700 | OsIRL3 | Detail |
| CX4g031992 | 4:20,529,425-20,533,479 | - | C1H4g14627 | C2H4g01330 | LOC_Os04g40090 | Os04g0476800 | OsNBR1 | Detail |
| CX4g034194 | 4:20,538,551-20,540,722 | + | C1H4g19548 | C2H4g29662 | LOC_Os04g40100 | Os04g0477000 | - | Detail |
| CX4g033655 | 4:20,544,022-20,544,510 | - | C1H4g16625 | C2H4g02766 | LOC_Os04g40120 | Os04g0477100 | - | Detail |
| CX4g031850 | 4:20,545,811-20,551,631 | - | C1H4g22165 | C2H4g28888 | LOC_Os04g40130 | Os04g0477200 | - | Detail |
| CX4g035932 | 4:20,556,086-20,558,608 | - | C1H4g04341 | C2H4g16963 | LOC_Os04g40150 | Os04g0477500 | - | Detail |
| CX4g032211 | 4:20,569,753-20,570,175 | + | C1H4g30761 | C2H4g03853 | LOC_Os04g40180 | Os04g0477900 | - | Detail |
| CX4g035771 | 4:20,576,683-20,580,971 | + | C1H4g19712 | C2H4g11207 | LOC_Os04g40290 | Os04g0479000 | CRC1 | Detail |
| CX4g036544 | 4:20,581,685-20,583,447 | - | C1H4g01004 | C2H4g19162 | LOC_Os04g40300 | Os04g0479100 | - | Detail |