| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g31584 | 9:14,397,174-14,398,148 | - | C2H9g05249 | CX9g055140 | LOC_Os09g28750 | Os09g0462200 | - | Detail |
| C1H9g31193 | 9:14,398,159-14,399,079 | - | C2H9g03017 | - | - | Os09g0462301 | - | Detail |
| C1H9g18452 | 9:14,402,609-14,405,130 | + | C2H9g27701 | CX9g057311 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| C1H9g29610 | 9:14,407,442-14,407,735 | + | C2H9g19629 | CX9g056435 | LOC_Os09g28780 | Os08g0475500 | OsCEP6, OsCEP6.1 | Detail |
| C1H9g28013 | 9:14,417,767-14,421,876 | + | C2H9g05705 | CX9g055048 | LOC_Os09g28810 | Os09g0462700 | - | Detail |
| C1H9g15723 | 9:14,423,139-14,423,470 | + | C2H9g21321 | - | - | Os09g0462850 | - | Detail |
| C1H9g15089 | 9:14,425,555-14,428,291 | - | C2H9g19364 | CX9g057216 | LOC_Os09g28830 | Os09g0462875 | - | Detail |
| C1H9g24460 | 9:14,431,895-14,435,261 | - | C2H9g06754 | CX9g056317 | LOC_Os09g28840 | Os09g0463100 | - | Detail |
| C1H9g16758 | 9:14,443,505-14,446,049 | - | C2H9g26932 | - | - | - | - | Detail |
| C1H9g08405 | 9:14,445,917-14,450,400 | + | C2H9g17616 | CX9g055989 | LOC_Os09g28850 | Os09g0463300 | - | Detail |
| C1H9g27922 | 9:14,462,626-14,463,366 | + | C2H8g04634 | CX8g053678 | LOC_Os09g28880 | Os09g0463600 | - | Detail |
| C1H9g22383 | 9:14,469,635-14,470,756 | + | - | CX8g050532 | LOC_Os09g28890 | Os09g0463700 | - | Detail |
| C1H9g29908 | 9:14,477,978-14,478,205 | + | C2H9g06208 | CX9g058102 | LOC_Os09g28900 | Os09g0463900 | - | Detail |
| C1H9g13495 | 9:14,479,436-14,479,918 | + | C2H9g06208 | CX9g055813 | LOC_Os09g28900 | Os09g0410700 | - | Detail |
| C1H9g11908 | 9:14,481,560-14,486,123 | - | C2H9g27359 | CX9g057340 | LOC_Os09g28910 | Os09g0464000 | - | Detail |
| C1H9g03015 | 9:14,485,149-14,486,023 | + | - | - | - | Os09g0464066 | - | Detail |
| C1H9g26305 | 9:14,498,312-14,499,307 | - | C2H9g21979 | CX9g056952 | LOC_Os09g28930 | Os09g0464300 | - | Detail |
| C1H9g02656 | 9:14,510,601-14,518,761 | - | C2H9g10275 | CX9g056356 | LOC_Os09g28940 | Os09g0464400 | - | Detail |
| C1H9g11367 | 9:14,531,631-14,532,587 | - | C2H9g26296 | CX9g057742 | LOC_Os09g29050 | Os09g0465400 | - | Detail |
| C1H9g04483 | 9:14,534,358-14,537,056 | + | C2H9g25155 | CX9g057144 | LOC_Os09g29060 | Os09g0465500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031592 | 4:20,453,016-20,455,427 | + | C1H4g27571 | C2H4g15875 | LOC_Os04g39910 | Os04g0475100 | SDRLK-61 | Detail |
| CX4g034833 | 4:20,459,326-20,461,734 | + | C1H4g19181 | C2H4g18216 | LOC_Os04g39930 | Os04g0475200 | SDRLK-62 | Detail |
| CX4g035822 | 4:20,467,317-20,467,847 | - | C1H4g16959 | C2H4g17863 | LOC_Os04g39950 | Os04g0475300 | - | Detail |
| CX4g035952 | 4:20,468,740-20,469,591 | + | - | C2H4g17299 | LOC_Os04g39960 | Os04g0475400 | - | Detail |
| CX4g033449 | 4:20,470,454-20,471,689 | - | C1H4g29172 | C2H4g05329 | LOC_Os04g39970 | Os04g0475500 | OsV4 | Detail |
| CX4g034856 | 4:20,472,895-20,474,176 | - | C1H4g28080 | C2H4g06421 | LOC_Os04g39980 | Os04g0475600 | DAO | Detail |
| CX4g033390 | 4:20,488,382-20,490,753 | + | C1H4g09528 | C2H4g03255 | LOC_Os04g40030 | Os04g0476000 | - | Detail |
| CX4g033811 | 4:20,491,820-20,497,906 | - | C1H4g27545 | C2H4g11644 | LOC_Os04g40040 | Os04g0476100 | - | Detail |
| CX4g032761 | 4:20,503,865-20,504,017 | + | - | - | - | - | - | Detail |
| CX4g033662 | 4:20,506,571-20,515,556 | + | C1H4g20165 | C2H4g01499 | LOC_Os04g40060 | Os04g0476500 | - | Detail |
| CX4g034928 | 4:20,517,656-20,524,166 | + | C1H4g28689 | C2H4g08434 | LOC_Os04g40070 | Os04g0476600 | - | Detail |
| CX4g036402 | 4:20,525,561-20,528,466 | + | C1H4g22382 | C2H4g27838 | LOC_Os04g40080 | Os04g0476700 | OsIRL3 | Detail |
| CX4g031992 | 4:20,529,425-20,533,479 | - | C1H4g14627 | C2H4g01330 | LOC_Os04g40090 | Os04g0476800 | OsNBR1 | Detail |
| CX4g034194 | 4:20,538,551-20,540,722 | + | C1H4g19548 | C2H4g29662 | LOC_Os04g40100 | Os04g0477000 | - | Detail |
| CX4g033655 | 4:20,544,022-20,544,510 | - | C1H4g16625 | C2H4g02766 | LOC_Os04g40120 | Os04g0477100 | - | Detail |
| CX4g031850 | 4:20,545,811-20,551,631 | - | C1H4g22165 | C2H4g28888 | LOC_Os04g40130 | Os04g0477200 | - | Detail |
| CX4g035932 | 4:20,556,086-20,558,608 | - | C1H4g04341 | C2H4g16963 | LOC_Os04g40150 | Os04g0477500 | - | Detail |
| CX4g032211 | 4:20,569,753-20,570,175 | + | C1H4g30761 | C2H4g03853 | LOC_Os04g40180 | Os04g0477900 | - | Detail |
| CX4g035771 | 4:20,576,683-20,580,971 | + | C1H4g19712 | C2H4g11207 | LOC_Os04g40290 | Os04g0479000 | CRC1 | Detail |
| CX4g036544 | 4:20,581,685-20,583,447 | - | C1H4g01004 | C2H4g19162 | LOC_Os04g40300 | Os04g0479100 | - | Detail |