| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g04794 | 9:8,951,584-8,954,311 | + | - | - | - | - | - | Detail |
| C2H9g27468 | 9:8,959,803-8,973,322 | + | C1H9g29897 | CX9g056988 | LOC_Os09g13630 | Os09g0306800 | OsEMF2b, GW9 | Detail |
| C2H9g03889 | 9:8,973,550-8,984,843 | - | C1H9g24374 | CX9g055423 | LOC_Os09g13610 | Os09g0306700 | OsMED25 | Detail |
| C2H9g13122 | 9:8,990,712-8,991,824 | + | C1H9g15362 | CX9g055847 | LOC_Os09g13600 | Os09g0306650 | - | Detail |
| C2H9g24132 | 9:9,005,264-9,006,092 | + | C1H9g18580 | CX9g055714 | LOC_Os09g13590 | Os09g0306500 | - | Detail |
| C2H9g15762 | 9:9,019,668-9,020,552 | - | C1H9g10670 | CX9g056842 | LOC_Os09g13570 | Os09g0306400 | BZIP71, OsbZIP71 | Detail |
| C2H9g08842 | 9:9,068,812-9,070,693 | - | C1H9g20244 | CX9g056900 | LOC_Os09g13410 | Os09g0304500 | - | Detail |
| C2H9g17219 | 9:9,083,715-9,084,786 | + | C1H9g28431 | CX9g057256 | LOC_Os09g13400 | Os09g0304400 | - | Detail |
| C2H9g18256 | 9:9,182,231-9,184,818 | - | - | CX9g055680 | - | - | - | Detail |
| C2H9g11105 | 9:9,231,055-9,231,475 | - | C1H11g23968 | CX9g057602 | LOC_Os10g01790 | - | - | Detail |
| C2H9g03639 | 9:9,238,197-9,246,446 | + | C1H9g22439 | CX9g056299 | LOC_Os09g17730 | Os09g0346400 | - | Detail |
| C2H9g03060 | 9:9,248,065-9,248,859 | + | C1H9g04697 | CX9g055763 | LOC_Os09g17740 | Os09g0346500 | CAB1R | Detail |
| C2H9g12579 | 9:9,252,468-9,255,425 | - | C1H9g02390 | CX9g056958 | LOC_Os09g17750 | Os09g0346600 | - | Detail |
| C2H9g29631 | 9:9,267,689-9,273,756 | - | C1H9g13223 | CX9g055122 | LOC_Os09g17760 | Os09g0346700 | - | Detail |
| C2H9g05792 | 9:9,283,857-9,287,569 | - | C1H9g09773 | CX9g054886 | LOC_Os09g17770 | Os09g0346900 | - | Detail |
| C2H9g20306 | 9:9,303,138-9,304,937 | + | C1H9g19359 | CX9g055922 | LOC_Os09g17810 | Os09g0347300 | - | Detail |
| C2H9g20367 | 9:9,311,420-9,315,390 | - | C1H9g27802 | CX9g057025 | LOC_Os09g17840 | Os09g0347700 | - | Detail |
| C2H9g15118 | 9:9,321,591-9,325,715 | - | C1H9g27802 | CX9g054842 | LOC_Os09g17840 | Os09g0347700 | - | Detail |
| C2H9g01207 | 9:9,325,450-9,325,632 | + | - | - | - | - | - | Detail |
| C2H9g23264 | 9:9,331,861-9,336,091 | + | C1H9g13400 | CX9g055178 | LOC_Os09g17850 | Os09g0347800 | HAT1, HAG704, OsHAG704 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033874 | 4:20,253,936-20,256,182 | - | C1H4g01338 | C2H4g03118 | LOC_Os04g39489 | Os04g0470700 | - | Detail |
| CX4g032387 | 4:20,271,710-20,273,440 | + | C1H4g02842 | C2H4g06381 | LOC_Os04g39520 | Os04g0471000 | - | Detail |
| CX4g034525 | 4:20,276,318-20,277,996 | - | C1H4g00776 | C2H4g03143 | LOC_Os04g39540 | Os04g0471300 | - | Detail |
| CX4g035713 | 4:20,281,196-20,281,600 | - | - | - | - | - | - | Detail |
| CX4g035565 | 4:20,285,862-20,291,541 | - | C1H4g08563 | C2H4g24543 | LOC_Os04g39560 | Os04g0471400 | - | Detail |
| CX4g035066 | 4:20,313,462-20,316,776 | - | C1H4g31685 | C2H4g24523 | LOC_Os04g39570 | Os04g0471700 | - | Detail |
| CX4g033693 | 4:20,329,245-20,330,431 | - | C1H4g16030 | C2H4g00702 | LOC_Os04g39590 | Os04g0472100 | - | Detail |
| CX4g032102 | 4:20,330,886-20,331,668 | - | C1H4g16030 | C2H4g03647 | LOC_Os04g39600 | Os04g0472200 | - | Detail |
| CX4g032882 | 4:20,336,531-20,336,692 | - | - | - | - | - | - | Detail |
| CX4g032977 | 4:20,338,716-20,339,303 | - | - | - | - | - | - | Detail |
| CX4g034292 | 4:20,339,577-20,342,788 | + | C1H4g00073 | C2H4g19420 | LOC_Os04g39610 | Os04g0472300 | - | Detail |
| CX4g034452 | 4:20,345,076-20,345,402 | - | - | - | - | - | - | Detail |
| CX4g035839 | 4:20,348,231-20,362,516 | + | C1H4g18621 | C2H4g05936 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| CX4g036049 | 4:20,363,101-20,364,690 | - | C1H4g12075 | C2H4g04802 | LOC_Os04g39660 | - | - | Detail |
| CX4g035542 | 4:20,365,146-20,367,304 | + | C1H4g21886 | C2H4g02841 | LOC_Os04g39670 | Os04g0472700 | - | Detail |
| CX4g033721 | 4:20,370,186-20,372,507 | + | - | C2H4g28146 | LOC_Os04g39680 | Os04g0472900 | - | Detail |
| CX4g031996 | 4:20,373,190-20,375,092 | - | C1H4g18594 | C2H4g20727 | LOC_Os04g39700 | Os04g0473400 | RPL6 | Detail |
| CX4g036319 | 4:20,376,708-20,377,209 | - | C1H4g22390 | C2H4g02603 | LOC_Os04g39770 | Os04g0473800 | FCP1, FCP1/OsCLE402, Os CLE402, OsCLE402 | Detail |
| CX4g034400 | 4:20,383,090-20,393,008 | - | C1H4g00302 | C2H4g23069 | LOC_Os04g39780 | Os04g0473900 | DWA1 | Detail |
| CX4g034463 | 4:20,393,291-20,393,500 | + | - | - | - | - | - | Detail |