| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g16057 | 2:23,062,223-23,067,108 | - | C2H2g02169 | CX2g023988 | LOC_Os02g40664 | Os02g0619600 | - | Detail |
| C1H2g04094 | 2:23,067,864-23,069,433 | + | C2H2g26987 | - | - | - | - | Detail |
| C1H2g31349 | 2:23,085,107-23,089,465 | + | C2H2g18142 | CX2g019895 | LOC_Os02g40680 | Os02g0620200 | - | Detail |
| C1H2g24265 | 2:23,094,513-23,094,949 | + | C2H2g22522 | CX2g023588 | LOC_Os02g40700 | Os02g0620400 | - | Detail |
| C1H2g23096 | 2:23,101,444-23,102,940 | + | C2H2g07540 | CX2g024155 | LOC_Os02g40710 | Os02g0620500 | OsAMT1;3 | Detail |
| C1H2g17359 | 2:23,108,963-23,110,453 | + | C2H2g29061 | CX2g024932 | LOC_Os02g40730 | Os02g0620600 | AMT1;2, OsAMT1;2, AMT1-2, Osamt1-3, "OsAMT1, 3", OsAMT1;3, OsAMT1.3, OsAMT1.2 | Detail |
| C1H2g09682 | 2:23,127,316-23,134,783 | + | C2H2g25432 | CX2g022252 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| C1H2g19949 | 2:23,135,236-23,141,033 | - | C2H2g23211 | CX2g021587 | LOC_Os02g40784 | Os02g0621300 | OsCER1 | Detail |
| C1H2g08472 | 2:23,141,722-23,142,237 | + | C2H2g09937 | - | LOC_Os02g40800 | Os02g0621400 | - | Detail |
| C1H2g27103 | 2:23,145,169-23,150,060 | - | C2H2g26983 | CX2g019928 | LOC_Os02g40810 | Os02g0621500 | - | Detail |
| C1H2g19112 | 2:23,156,268-23,157,103 | - | C2H2g10810 | CX2g022093 | LOC_Os02g40820 | Os02g0621600 | - | Detail |
| C1H2g19508 | 2:23,159,646-23,165,652 | + | C2H2g06529 | CX2g023876 | LOC_Os02g40830 | Os02g0621700 | - | Detail |
| C1H2g14578 | 2:23,167,307-23,172,147 | - | C2H2g19681 | CX2g021578 | LOC_Os02g40840 | Os02g0621800 | HWH1, hwh1 | Detail |
| C1H2g29233 | 2:23,177,311-23,183,369 | + | C2H2g04248 | CX2g024826 | LOC_Os02g40860 | Os02g0622100 | HBD2, OsCKI1, CKI, hbd2, CKI1, LTG1, OsCKI1/LTRPK1 | Detail |
| C1H2g26754 | 2:23,187,758-23,189,168 | - | C2H2g00421 | CX2g020034 | LOC_Os02g40880 | Os02g0622300 | - | Detail |
| C1H2g28817 | 2:23,189,250-23,192,333 | + | C2H2g15374 | CX2g023937 | LOC_Os02g40890 | Os02g0622400 | - | Detail |
| C1H2g19529 | 2:23,193,333-23,196,120 | - | C2H2g11747 | CX2g019570 | LOC_Os02g40900 | Os02g0622500 | - | Detail |
| C1H2g10086 | 2:23,209,175-23,212,845 | + | C2H2g13801 | CX2g020385 | LOC_Os02g41450 | Os02g0623300 | - | Detail |
| C1H2g09216 | 2:23,243,978-23,255,851 | - | C2H2g23020 | CX2g021983 | LOC_Os02g41470 | Os02g0623500 | - | Detail |
| C1H2g23116 | 2:23,256,131-23,257,436 | + | - | - | - | Os06g0267200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033308 | 4:20,086,126-20,094,232 | - | C1H4g23954 | C2H4g02293 | LOC_Os04g39220 | Os04g0466700 | - | Detail |
| CX4g033180 | 4:20,096,872-20,097,524 | + | C1H4g26968 | C2H4g08624 | LOC_Os04g39230 | Os04g0467000 | - | Detail |
| CX4g031432 | 4:20,098,361-20,101,392 | - | C1H4g20963 | C2H4g13693 | LOC_Os04g39240 | Os04g0467100 | - | Detail |
| CX4g035463 | 4:20,121,071-20,122,525 | - | - | C2H4g06059 | LOC_Os04g39250 | Os04g0467300 | - | Detail |
| CX4g033763 | 4:20,123,655-20,128,174 | - | C1H4g31113 | C2H4g09111 | LOC_Os04g39260 | Os04g0467400 | - | Detail |
| CX4g035308 | 4:20,128,722-20,131,972 | - | C1H4g30490 | C2H4g05588 | LOC_Os04g39270 | Os04g0467700 | - | Detail |
| CX4g032151 | 4:20,133,707-20,137,919 | - | C1H4g19832 | C2H4g22782 | LOC_Os04g39280 | Os04g0467800 | - | Detail |
| CX4g035147 | 4:20,138,668-20,144,826 | - | C1H4g15083 | C2H4g10668 | LOC_Os04g53760 | Os04g0467901 | OsKCH2 | Detail |
| CX4g033844 | 4:20,156,293-20,156,466 | + | - | - | - | Os02g0188201 | - | Detail |
| CX4g035959 | 4:20,204,759-20,207,569 | - | C1H4g14312 | C2H4g16193 | LOC_Os04g39410 | Os04g0469400 | - | Detail |
| CX4g031453 | 4:20,208,208-20,208,525 | + | - | - | - | - | - | Detail |
| CX4g033399 | 4:20,208,949-20,209,353 | - | C1H2g17655 | C2H4g03036 | - | - | - | Detail |
| CX4g032275 | 4:20,210,355-20,210,668 | - | C1H10g24741 | C2H1g05458 | - | - | - | Detail |
| CX4g031835 | 4:20,211,266-20,213,492 | + | C1H4g28716 | C2H4g20947 | LOC_Os04g39420 | Os04g0469500 | - | Detail |
| CX4g031362 | 4:20,215,728-20,219,594 | - | C1H4g13688 | C2H4g02324 | LOC_Os04g39430 | Os04g0469800 | - | Detail |
| CX4g033779 | 4:20,240,361-20,242,211 | + | C1H4g02373 | C2H4g09164 | LOC_Os04g39440 | Os04g0470100 | - | Detail |
| CX4g034394 | 4:20,243,151-20,243,321 | - | C1H4g27787 | C2H4g05245 | - | Os04g0470150 | - | Detail |
| CX4g034892 | 4:20,244,535-20,246,466 | - | C1H4g27787 | C2H4g05245 | LOC_Os04g39444 | - | - | Detail |
| CX4g033373 | 4:20,247,701-20,250,263 | - | C1H4g30504 | C2H4g03464 | LOC_Os04g39450 | Os04g0470300 | - | Detail |
| CX4g032112 | 4:20,251,438-20,252,767 | - | C1H4g16186 | C2H4g12515 | LOC_Os04g39470 | Os04g0470600 | OsMYB80 | Detail |