| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03777 | 6:7,003,407-7,004,426 | - | - | CX6g041399 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| C2H6g04113 | 6:7,007,145-7,008,692 | + | C1H6g02316 | CX6g044724 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| C2H6g00648 | 6:7,026,926-7,027,972 | + | C1H6g09969 | CX6g043290 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| C2H6g03619 | 6:7,084,002-7,098,976 | + | C1H6g11559 | CX6g045764 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| C2H6g01049 | 6:7,100,001-7,107,702 | - | C1H6g18024 | CX6g044644 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| C2H6g13770 | 6:7,153,337-7,153,943 | - | C1H6g12074 | CX6g041615 | - | - | - | Detail |
| C2H6g10609 | 6:7,163,058-7,163,564 | + | C1H6g12074 | CX6g045748 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| C2H6g05565 | 6:7,164,963-7,165,619 | + | - | CX6g042529 | - | - | - | Detail |
| C2H6g15261 | 6:7,187,480-7,191,271 | - | C1H6g28805 | CX6g041283 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| C2H6g21532 | 6:7,218,192-7,219,673 | - | - | CX6g045707 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| C2H6g29156 | 6:7,257,704-7,259,179 | + | - | CX6g041231 | LOC_Os06g15020 | Os06g0262200 | OsCUT6 | Detail |
| C2H6g22045 | 6:7,300,310-7,301,791 | - | - | CX6g043029 | LOC_Os06g15170 | Os06g0262800 | OsCUT7 | Detail |
| C2H6g13890 | 6:7,319,272-7,320,855 | + | - | - | - | - | - | Detail |
| C2H6g18864 | 6:7,320,873-7,321,216 | + | - | - | - | - | - | Detail |
| C2H6g20291 | 6:7,321,312-7,323,501 | - | - | CX6g043029 | LOC_Os06g15250 | Os06g0263400 | OsCUT8 | Detail |
| C2H6g11848 | 6:7,340,325-7,342,073 | + | C1H6g14061 | CX6g043939 | LOC_Os06g15330 | Os06g0264200 | OsCOL16 | Detail |
| C2H6g27689 | 6:7,357,477-7,363,510 | + | C1H6g03979 | CX6g044650 | LOC_Os06g15360 | Os06g0264300 | - | Detail |
| C2H6g23695 | 6:7,373,848-7,378,740 | + | C1H6g06916 | CX6g042595 | LOC_Os06g15370 | Os06g0264500 | OsNPF3.1 | Detail |
| C2H6g28059 | 6:7,378,868-7,379,221 | - | - | CX6g043321 | LOC_Os06g15380 | Os06g0264700 | - | Detail |
| C2H6g15511 | 6:7,380,099-7,380,488 | - | - | CX6g042083 | LOC_Os06g15390 | Os06g0264700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035434 | 4:19,969,693-19,969,842 | + | - | - | - | - | - | Detail |
| CX4g036034 | 4:19,972,944-19,973,237 | - | C1H4g20578 | C2H4g26653 | - | - | - | Detail |
| CX4g036661 | 4:19,985,189-19,985,341 | + | - | - | LOC_Os04g45665 | Os04g0611050 | - | Detail |
| CX4g035608 | 4:19,985,857-19,991,695 | - | C1H4g22118 | C2H4g00542 | LOC_Os04g39060 | Os04g0464800 | OsCFM2 | Detail |
| CX4g032500 | 4:20,001,404-20,003,269 | - | C1H4g29554 | C2H4g28234 | LOC_Os04g39080 | Os04g0464966 | OsFbox217, Os_F0121, MOF | Detail |
| CX4g036673 | 4:20,004,155-20,009,848 | + | C1H4g24682 | C2H4g22620 | LOC_Os04g39090 | Os04g0465000 | - | Detail |
| CX4g035580 | 4:20,011,378-20,012,385 | - | C1H4g07127 | C2H4g29666 | LOC_Os04g39100 | Os04g0465100 | - | Detail |
| CX4g036591 | 4:20,014,642-20,015,052 | - | - | C2H4g09735 | - | - | - | Detail |
| CX4g035943 | 4:20,022,631-20,022,804 | - | - | - | - | - | - | Detail |
| CX4g036602 | 4:20,025,172-20,025,819 | - | C1H4g22908 | C2H4g19933 | LOC_Os04g39110 | Os04g0465300 | GASR2, OsGASR2 | Detail |
| CX4g032885 | 4:20,029,169-20,029,327 | + | - | - | - | Os01g0612350 | - | Detail |
| CX4g032042 | 4:20,032,070-20,034,559 | + | C1H4g23208 | C2H4g08157 | LOC_Os04g39130 | Os04g0465432 | - | Detail |
| CX4g034470 | 4:20,035,016-20,036,637 | - | C1H4g20155 | C2H4g13916 | LOC_Os04g39140 | Os04g0465500 | - | Detail |
| CX4g035849 | 4:20,038,180-20,038,858 | + | C1H4g19202 | C2H4g18235 | LOC_Os04g39150 | Os04g0465600 | OsMLP423 | Detail |
| CX4g033981 | 4:20,040,375-20,045,338 | + | C1H4g22593 | C2H4g13664 | LOC_Os04g39160 | Os04g0465700 | OsRDR2, FEM1 | Detail |
| CX4g033685 | 4:20,046,957-20,048,730 | + | C1H4g27473 | C2H4g05826 | LOC_Os04g39170 | Os04g0465800 | - | Detail |
| CX4g033509 | 4:20,049,387-20,051,036 | - | C1H4g15375 | C2H4g07790 | LOC_Os04g39180 | Os04g0465900 | OsARK2 | Detail |
| CX4g032468 | 4:20,057,093-20,057,329 | + | - | C2H4g18940 | - | Os04g0466000 | - | Detail |
| CX4g036412 | 4:20,064,264-20,067,349 | - | C1H4g10317 | C2H4g05821 | LOC_Os04g39190 | Os04g0466100 | - | Detail |
| CX4g035488 | 4:20,081,777-20,084,981 | + | C1H4g15967 | C2H4g04162 | LOC_Os04g39210 | Os04g0466600 | - | Detail |