| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g22275 | 9:6,438,106-6,439,258 | + | C2H9g07479 | CX9g057641 | - | Os09g0482840 | - | Detail |
| C1H9g04248 | 9:6,441,717-6,443,186 | + | C2H9g28255 | CX9g057610 | LOC_Os09g12530 | Os09g0296700 | - | Detail |
| C1H9g29624 | 9:6,441,963-6,442,966 | - | - | - | - | - | - | Detail |
| C1H9g21187 | 9:6,448,403-6,451,198 | + | C2H9g16228 | CX9g056490 | LOC_Os09g12540 | Os09g0296800 | OsLhcb7 | Detail |
| C1H9g06139 | 9:6,452,735-6,459,478 | + | C2H9g17110 | CX9g056084 | LOC_Os09g12550 | Os09g0296900 | HSLG2 | Detail |
| C1H9g10693 | 9:6,460,693-6,467,606 | + | C2H9g04106 | CX9g058097 | LOC_Os09g12560 | Os09g0297000 | FC1 | Detail |
| C1H9g27717 | 9:6,468,043-6,471,246 | - | C2H9g24691 | CX9g054933 | LOC_Os09g12570 | Os09g0297100 | - | Detail |
| C1H9g22827 | 9:6,479,465-6,482,765 | - | C2H9g07019 | CX9g058188 | LOC_Os09g12600 | Os09g0297400 | PPT1, OsPPT1 | Detail |
| C1H9g17081 | 9:6,485,287-6,485,873 | - | C2H9g10281 | CX9g054945 | LOC_Os09g12620 | Os09g0297800 | - | Detail |
| C1H9g28667 | 9:6,486,820-6,487,512 | - | C2H9g19494 | CX9g057472 | LOC_Os09g12630 | Os09g0297900 | - | Detail |
| C1H9g31684 | 9:6,490,842-6,495,431 | + | C2H9g30271 | CX9g056555 | LOC_Os09g12650 | Os09g0298100 | OsPFP1α4 | Detail |
| C1H9g00979 | 9:6,496,155-6,500,706 | - | C2H9g02028 | CX9g057527 | LOC_Os09g12660 | Os09g0298200 | - | Detail |
| C1H9g04278 | 9:6,506,799-6,511,865 | + | C2H9g04760 | CX9g056017 | LOC_Os09g12710 | Os09g0298400 | - | Detail |
| C1H9g29739 | 9:6,513,132-6,518,148 | - | C2H9g25888 | CX9g056522 | LOC_Os09g12720 | Os09g0298500 | - | Detail |
| C1H9g12166 | 9:6,528,716-6,535,957 | - | C2H9g07648 | CX9g057949 | LOC_Os09g12730 | Os09g0298700 | OsRRM | Detail |
| C1H9g29394 | 9:6,550,089-6,552,860 | + | C2H9g25106 | CX9g057083 | LOC_Os09g12750 | Os09g0299000 | OsPHL3 | Detail |
| C1H9g12987 | 9:6,559,922-6,561,970 | + | C2H9g10023 | CX9g057083 | LOC_Os09g12770 | Os09g0299200 | OsMYBc, MYBc | Detail |
| C1H9g12401 | 9:6,571,220-6,574,455 | + | C2H9g22093 | CX9g058183 | LOC_Os09g12780 | Os09g0299300 | - | Detail |
| C1H9g11121 | 9:6,575,537-6,579,655 | - | C2H9g17440 | CX9g056426 | LOC_Os09g12790 | Os09g0299400 | - | Detail |
| C1H9g03619 | 9:6,585,361-6,589,526 | - | C2H9g04412 | CX9g056639 | LOC_Os09g12800 | Os09g0299500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035671 | 4:19,863,178-19,864,744 | - | C1H4g20046 | C2H4g14143 | LOC_Os04g38850 | Os04g0462300 | - | Detail |
| CX4g031760 | 4:19,865,805-19,869,081 | - | C1H4g07343 | C2H4g21045 | LOC_Os04g38860 | Os04g0462400 | OsLHT4 | Detail |
| CX4g031560 | 4:19,872,850-19,875,280 | + | C1H4g23173 | C2H4g15046 | LOC_Os04g38870 | Os04g0462500 | - | Detail |
| CX4g033001 | 4:19,876,270-19,878,320 | - | C1H4g05269 | C2H4g09025 | LOC_Os04g38880 | Os04g0462600 | - | Detail |
| CX4g034025 | 4:19,884,671-19,885,525 | - | C1H4g30627 | C2H4g27908 | LOC_Os04g38900 | Os04g0462900 | - | Detail |
| CX4g032418 | 4:19,887,985-19,890,078 | - | C1H4g28569 | C2H4g10984 | LOC_Os04g38910 | Os04g0463000 | - | Detail |
| CX4g035106 | 4:19,896,027-19,896,980 | - | - | - | - | - | - | Detail |
| CX4g036267 | 4:19,898,884-19,900,713 | + | C1H4g05728 | C2H4g08523 | LOC_Os04g38930 | Os04g0463300 | - | Detail |
| CX4g034571 | 4:19,901,627-19,903,995 | - | C1H4g28377 | C2H4g23255 | LOC_Os04g38940 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| CX4g032581 | 4:19,904,464-19,904,637 | - | - | - | LOC_Os04g45665 | Os04g0611050 | - | Detail |
| CX4g036538 | 4:19,906,129-19,909,535 | - | C1H4g09561 | C2H4g28763 | LOC_Os04g38950 | Os04g0463500 | TDD1, OASB1 | Detail |
| CX4g033480 | 4:19,911,650-19,911,814 | + | - | - | - | - | - | Detail |
| CX4g033159 | 4:19,914,918-19,916,095 | + | C1H4g11967 | C2H4g28177 | LOC_Os04g38960 | Os04g0463600 | - | Detail |
| CX4g033067 | 4:19,918,986-19,920,372 | - | C1H4g05080 | C2H4g13162 | LOC_Os04g38970 | Os04g0463700 | - | Detail |
| CX4g031871 | 4:19,933,709-19,934,068 | + | C1H4g30641 | C2H4g12038 | LOC_Os04g39010 | Os04g0464100 | - | Detail |
| CX4g031616 | 4:19,942,866-19,943,030 | + | - | - | - | - | - | Detail |
| CX4g032487 | 4:19,943,805-19,948,242 | - | C1H4g01794 | C2H4g13985 | LOC_Os04g39020 | Os04g0464200 | BAD1, Badh1, badh1, BAD1, BADH1, OsBADH1, BADH | Detail |
| CX4g035491 | 4:19,951,007-19,954,972 | - | C1H4g07451 | C2H4g00984 | LOC_Os04g39030 | Os04g0464400 | - | Detail |
| CX4g031502 | 4:19,957,790-19,962,474 | + | C1H4g23214 | C2H4g04170 | LOC_Os04g39040 | Os04g0464500 | - | Detail |
| CX4g036018 | 4:19,963,291-19,964,289 | + | - | C2H4g17001 | LOC_Os04g39050 | Os04g0464600 | - | Detail |