| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02353 | 1:11,674,300-11,679,910 | + | C1H1g28713 | CX1g000663 | LOC_Os01g24060 | Os01g0343200 | - | Detail |
| C2H1g26949 | 1:11,685,554-11,687,349 | + | C1H1g18384 | CX1g001080 | LOC_Os01g24070 | Os01g0343300 | OsGATA8 | Detail |
| C2H1g05738 | 1:11,696,982-11,699,421 | - | C1H1g01015 | CX1g003896 | LOC_Os01g24090 | Os01g0343500 | - | Detail |
| C2H1g07085 | 1:11,827,376-11,830,076 | + | - | - | LOC_Os01g27449 | Os01g0372100 | - | Detail |
| C2H1g16748 | 1:11,899,919-11,901,719 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g05112 | 1:11,937,505-11,943,811 | + | C1H1g27449 | CX1g005895 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g30571 | 1:11,948,445-11,952,134 | - | C1H1g01597 | CX1g001516 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H1g15253 | 1:11,954,093-11,955,767 | - | - | - | - | - | - | Detail |
| C2H1g16729 | 1:11,956,738-11,959,165 | - | - | - | - | - | - | Detail |
| C2H1g03429 | 1:12,036,103-12,038,238 | + | C1H1g12059 | CX1g004622 | LOC_Os01g26980 | Os01g0738500 | - | Detail |
| C2H1g13415 | 1:12,067,581-12,069,632 | + | C1H1g13768 | CX1g001811 | - | Os01g0527900 | - | Detail |
| C2H1g07465 | 1:12,086,685-12,087,860 | + | C1H1g21970 | CX1g002117 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| C2H1g25406 | 1:12,110,695-12,115,118 | + | C1H1g27382 | CX1g002994 | LOC_Os01g24470 | Os01g0347000 | - | Detail |
| C2H1g02246 | 1:12,115,613-12,120,143 | - | C1H1g08071 | CX1g000129 | LOC_Os01g24480 | Os01g0347100 | - | Detail |
| C2H1g19331 | 1:12,125,101-12,126,796 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g13817 | 1:12,132,010-12,134,037 | + | C1H1g27449 | CX1g006871 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g12753 | 1:12,181,907-12,186,318 | - | C1H1g04145 | CX1g004547 | - | Os01g0852650 | - | Detail |
| C2H1g06141 | 1:12,187,581-12,188,746 | - | C1H1g09482 | CX1g001042 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| C2H1g29017 | 1:12,191,860-12,192,978 | + | C1H1g19481 | CX1g002830 | LOC_Os01g24560 | Os01g0347600 | - | Detail |
| C2H1g00502 | 1:12,208,552-12,209,729 | + | C1H1g19455 | CX1g004946 | LOC_Os01g24550 | Os01g0348000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035386 | 4:19,729,951-19,732,406 | + | C1H4g19139 | C2H4g25768 | LOC_Os04g38670 | Os04g0460200 | OsATL14, Bh4 | Detail |
| CX4g036106 | 4:19,739,472-19,741,537 | + | C1H4g00598 | C2H4g01029 | LOC_Os04g38680 | Os04g0460300 | - | Detail |
| CX4g034602 | 4:19,742,547-19,742,708 | - | - | C2H4g03365 | - | Os04g0460350 | - | Detail |
| CX4g033651 | 4:19,745,065-19,745,848 | + | C1H4g20972 | C2H4g15731 | LOC_Os04g38690 | Os04g0460400 | CASP5, OsCASP5 | Detail |
| CX4g035215 | 4:19,748,688-19,750,158 | + | C1H4g26714 | C2H4g29420 | LOC_Os04g38700 | Os04g0460500 | - | Detail |
| CX4g034374 | 4:19,762,175-19,762,801 | + | - | - | - | - | - | Detail |
| CX4g031963 | 4:19,767,640-19,767,807 | + | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX4g035794 | 4:19,774,700-19,776,320 | + | C1H4g00856 | C2H4g09182 | LOC_Os04g38720 | Os04g0460600 | NAC2, OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2 | Detail |
| CX4g031747 | 4:19,782,601-19,785,503 | - | C1H4g10275 | C2H4g21139 | LOC_Os04g38730 | - | - | Detail |
| CX4g032831 | 4:19,793,591-19,793,869 | + | - | - | - | - | - | Detail |
| CX4g033056 | 4:19,803,699-19,805,916 | + | C1H4g16192 | C2H4g04335 | LOC_Os04g38740 | Os04g0461000 | Os2R_MYB43 | Detail |
| CX4g035604 | 4:19,807,622-19,809,013 | + | C1H4g01178 | C2H4g17531 | LOC_Os04g38750 | Os04g0461100 | - | Detail |
| CX4g034810 | 4:19,809,997-19,810,221 | + | - | - | - | - | - | Detail |
| CX4g034462 | 4:19,821,101-19,822,157 | + | C1H4g10260 | C2H4g02198 | LOC_Os04g38770 | Os04g0461300 | - | Detail |
| CX4g034228 | 4:19,829,230-19,829,463 | - | - | - | - | Os04g0461400 | - | Detail |
| CX4g035338 | 4:19,830,182-19,830,898 | + | C1H4g10260 | C2H4g25911 | LOC_Os04g38780 | Os04g0304400 | OsMADS25 | Detail |
| CX4g031698 | 4:19,839,149-19,839,523 | - | - | - | - | - | - | Detail |
| CX4g032154 | 4:19,843,714-19,844,795 | - | C1H4g09833 | C2H4g15152 | - | Os04g0461600 | - | Detail |
| CX4g033096 | 4:19,852,358-19,855,219 | - | C1H4g11139 | C2H4g04073 | LOC_Os04g38810 | Os04g0461800 | - | Detail |
| CX4g034495 | 4:19,862,181-19,862,943 | + | C1H4g28167 | C2H4g25655 | LOC_Os04g38840 | Os04g0462200 | - | Detail |