| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19784 | 4:27,335,340-27,336,862 | - | C2H4g04663 | CX4g035396 | LOC_Os04g52720 | Os04g0617900 | - | Detail |
| C1H4g16144 | 4:27,341,358-27,345,597 | + | C2H4g20761 | CX4g036359 | - | - | - | Detail |
| C1H4g21738 | 4:27,347,008-27,350,734 | + | C2H4g14147 | CX4g032842 | LOC_Os04g52730 | Os04g0618200 | - | Detail |
| C1H4g28262 | 4:27,354,171-27,354,467 | + | C2H4g20866 | CX4g034575 | LOC_Os04g52750 | Os04g0618400 | - | Detail |
| C1H4g01403 | 4:27,355,456-27,359,541 | - | C2H4g09538 | CX4g035558 | LOC_Os04g52760 | Os04g0618500 | - | Detail |
| C1H4g16234 | 4:27,361,688-27,362,774 | + | C2H4g06850 | CX4g034460 | LOC_Os04g52770 | Os04g0618600 | PIF1 | Detail |
| C1H4g28199 | 4:27,363,964-27,368,068 | - | C2H4g10397 | CX4g034704 | LOC_Os04g52780 | Os04g0618700 | OsFLS2 | Detail |
| C1H4g22303 | 4:27,382,282-27,385,360 | - | C2H4g00816 | CX4g036144 | LOC_Os04g52810 | Os04g0619000 | ONAC083 | Detail |
| C1H4g07288 | 4:27,389,779-27,391,289 | + | - | - | LOC_Os04g52820 | - | - | Detail |
| C1H4g06933 | 4:27,391,734-27,392,098 | + | C2H4g08987 | CX4g032452 | - | - | - | Detail |
| C1H4g18636 | 4:27,400,694-27,403,858 | + | C2H4g28780 | CX4g031427 | LOC_Os04g52830 | Os04g0619300 | Ctb1 | Detail |
| C1H4g13931 | 4:27,404,926-27,408,291 | - | C2H4g02197 | CX4g035196 | LOC_Os04g52840 | Os04g0619400 | OsRLCK160 | Detail |
| C1H4g15202 | 4:27,414,637-27,417,536 | + | C2H4g23444 | CX4g033062 | LOC_Os04g52850 | Os04g0619500 | - | Detail |
| C1H4g24641 | 4:27,419,171-27,421,705 | - | C2H4g18841 | CX4g033748 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| C1H4g04907 | 4:27,425,704-27,428,943 | - | C2H4g25907 | - | - | - | - | Detail |
| C1H4g18235 | 4:27,441,312-27,446,700 | + | C2H4g06612 | CX4g036286 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| C1H4g18046 | 4:27,447,425-27,459,871 | - | C2H4g03746 | CX4g032062 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| C1H4g10267 | 4:27,463,348-27,464,456 | - | - | - | - | - | - | Detail |
| C1H4g11396 | 4:27,467,836-27,470,683 | + | C2H4g02835 | CX4g031475 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| C1H4g16306 | 4:27,471,210-27,471,907 | - | - | - | LOC_Os04g52930 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035386 | 4:19,729,951-19,732,406 | + | C1H4g19139 | C2H4g25768 | LOC_Os04g38670 | Os04g0460200 | OsATL14, Bh4 | Detail |
| CX4g036106 | 4:19,739,472-19,741,537 | + | C1H4g00598 | C2H4g01029 | LOC_Os04g38680 | Os04g0460300 | - | Detail |
| CX4g034602 | 4:19,742,547-19,742,708 | - | - | C2H4g03365 | - | Os04g0460350 | - | Detail |
| CX4g033651 | 4:19,745,065-19,745,848 | + | C1H4g20972 | C2H4g15731 | LOC_Os04g38690 | Os04g0460400 | CASP5, OsCASP5 | Detail |
| CX4g035215 | 4:19,748,688-19,750,158 | + | C1H4g26714 | C2H4g29420 | LOC_Os04g38700 | Os04g0460500 | - | Detail |
| CX4g034374 | 4:19,762,175-19,762,801 | + | - | - | - | - | - | Detail |
| CX4g031963 | 4:19,767,640-19,767,807 | + | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX4g035794 | 4:19,774,700-19,776,320 | + | C1H4g00856 | C2H4g09182 | LOC_Os04g38720 | Os04g0460600 | NAC2, OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2 | Detail |
| CX4g031747 | 4:19,782,601-19,785,503 | - | C1H4g10275 | C2H4g21139 | LOC_Os04g38730 | - | - | Detail |
| CX4g032831 | 4:19,793,591-19,793,869 | + | - | - | - | - | - | Detail |
| CX4g033056 | 4:19,803,699-19,805,916 | + | C1H4g16192 | C2H4g04335 | LOC_Os04g38740 | Os04g0461000 | Os2R_MYB43 | Detail |
| CX4g035604 | 4:19,807,622-19,809,013 | + | C1H4g01178 | C2H4g17531 | LOC_Os04g38750 | Os04g0461100 | - | Detail |
| CX4g034810 | 4:19,809,997-19,810,221 | + | - | - | - | - | - | Detail |
| CX4g034462 | 4:19,821,101-19,822,157 | + | C1H4g10260 | C2H4g02198 | LOC_Os04g38770 | Os04g0461300 | - | Detail |
| CX4g034228 | 4:19,829,230-19,829,463 | - | - | - | - | Os04g0461400 | - | Detail |
| CX4g035338 | 4:19,830,182-19,830,898 | + | C1H4g10260 | C2H4g25911 | LOC_Os04g38780 | Os04g0304400 | OsMADS25 | Detail |
| CX4g031698 | 4:19,839,149-19,839,523 | - | - | - | - | - | - | Detail |
| CX4g032154 | 4:19,843,714-19,844,795 | - | C1H4g09833 | C2H4g15152 | - | Os04g0461600 | - | Detail |
| CX4g033096 | 4:19,852,358-19,855,219 | - | C1H4g11139 | C2H4g04073 | LOC_Os04g38810 | Os04g0461800 | - | Detail |
| CX4g034495 | 4:19,862,181-19,862,943 | + | C1H4g28167 | C2H4g25655 | LOC_Os04g38840 | Os04g0462200 | - | Detail |