| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17831 | 1:36,696,932-36,698,905 | - | C1H1g14395 | CX1g005035 | LOC_Os01g71262 | Os01g0939400 | - | Detail |
| C2H1g21755 | 1:36,705,242-36,709,576 | + | C1H1g19591 | CX1g007004 | LOC_Os01g71280 | Os01g0939600 | - | Detail |
| C2H1g29286 | 1:36,710,705-36,724,570 | + | C1H1g21264 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C2H1g28290 | 1:36,724,845-36,729,879 | + | C1H1g12592 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C2H1g22141 | 1:36,757,996-36,760,764 | + | C1H1g26080 | CX1g000893 | LOC_Os01g71310 | Os01g0940000 | CKX4, OsCKX4, ckx4, OsSCRM, OsSCRM2, SCRM, SCRM2 | Detail |
| C2H1g01876 | 1:36,763,587-36,766,798 | - | C1H1g08967 | CX1g004002 | LOC_Os01g71320 | Os01g0940100 | - | Detail |
| C2H1g23541 | 1:36,769,292-36,769,639 | - | C1H1g08967 | CX1g004002 | LOC_Os01g71320 | Os01g0940100 | - | Detail |
| C2H1g06863 | 1:36,790,745-36,791,275 | + | C1H1g04585 | CX1g006883 | LOC_Os01g71330 | Os01g0940600 | - | Detail |
| C2H1g01858 | 1:36,794,410-36,796,131 | + | C1H1g16091 | CX1g000254 | LOC_Os01g71340 | Os01g0940700 | - | Detail |
| C2H1g03308 | 1:36,797,876-36,799,254 | + | C1H1g10602 | CX1g000254 | LOC_Os01g71350 | Os01g0940800 | Gns6 | Detail |
| C2H1g26876 | 1:36,803,685-36,804,841 | + | C1H1g16335 | CX1g000254 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C2H1g01984 | 1:36,808,469-36,809,631 | + | C1H1g16091 | CX1g004707 | LOC_Os01g71400 | Os01g0944500 | - | Detail |
| C2H1g16744 | 1:36,812,907-36,814,022 | + | C1H1g17272 | CX1g004794 | LOC_Os01g71410 | Os01g0941500 | - | Detail |
| C2H1g10883 | 1:36,817,679-36,819,593 | - | C1H1g10405 | CX1g000710 | LOC_Os01g71420 | Os01g0941800 | - | Detail |
| C2H1g22406 | 1:36,826,438-36,827,760 | - | C1H1g13310 | CX1g006806 | LOC_Os01g71460 | Os01g0942200 | - | Detail |
| C2H1g09469 | 1:36,828,146-36,831,987 | - | C1H1g19466 | CX1g002838 | LOC_Os01g71474 | Os01g0942300 | OsEGL2 | Detail |
| C2H1g19657 | 1:36,839,238-36,841,002 | - | C1H1g16335 | CX1g004794 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C2H1g18324 | 1:36,842,401-36,843,306 | - | C1H1g09892 | CX1g004621 | LOC_Os01g71680 | Os01g0944800 | - | Detail |
| C2H1g11627 | 1:36,845,182-36,846,153 | - | C1H1g23548 | CX1g003176 | LOC_Os01g71690 | Os01g0947000 | - | Detail |
| C2H1g30428 | 1:36,847,690-36,851,615 | - | C1H1g21476 | CX1g004650 | LOC_Os01g71690 | Os01g0945001 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036561 | 4:19,450,385-19,452,900 | + | C1H4g27712 | C2H4g05982 | LOC_Os04g37980 | Os04g0452700 | OsMST1, OsSTP1 | Detail |
| CX4g034947 | 4:19,458,564-19,463,636 | + | C1H4g28777 | C2H4g06218 | LOC_Os04g37990 | Os04g0453200 | OsSTP15 | Detail |
| CX4g032909 | 4:19,469,977-19,470,312 | - | - | - | LOC_Os10g10798 | Os10g0187366 | - | Detail |
| CX4g032196 | 4:19,478,479-19,478,925 | - | - | - | - | - | - | Detail |
| CX4g034372 | 4:19,489,873-19,491,564 | + | C1H4g15796 | C2H4g29252 | LOC_Os04g38010 | Os04g0453300 | OsSTP16 | Detail |
| CX4g033922 | 4:19,491,794-19,496,536 | - | C1H4g03364 | C2H4g22075 | LOC_Os04g38026 | Os04g0454200 | OsSTP18 | Detail |
| CX4g033029 | 4:19,514,230-19,518,115 | + | C1H4g04258 | C2H4g09683 | LOC_Os04g38220 | Os04g0454200 | OsSTP18 | Detail |
| CX4g032194 | 4:19,542,571-19,545,712 | - | C1H4g01030 | C2H4g09229 | LOC_Os04g38310 | Os04g0455600 | - | Detail |
| CX4g035883 | 4:19,548,002-19,548,655 | - | C1H4g29223 | C2H4g18556 | LOC_Os04g38320 | Os04g0455700 | - | Detail |
| CX4g035295 | 4:19,550,575-19,553,458 | - | C1H4g03280 | C2H4g18168 | LOC_Os04g38330 | Os04g0455800 | - | Detail |
| CX4g034220 | 4:19,555,132-19,559,955 | - | C1H4g03811 | C2H4g00429 | LOC_Os04g38340 | Os04g0455900 | - | Detail |
| CX4g032706 | 4:19,568,361-19,568,996 | + | C1H4g01343 | C2H4g11871 | LOC_Os04g38360 | Os04g0456200 | - | Detail |
| CX4g032987 | 4:19,571,801-19,571,977 | - | - | - | LOC_Os08g20090 | Os12g0107300 | - | Detail |
| CX4g031844 | 4:19,576,070-19,576,685 | + | C1H4g04728 | C2H4g06670 | LOC_Os04g38370 | Os04g0456300 | - | Detail |
| CX4g034632 | 4:19,579,688-19,580,377 | + | C1H4g10291 | C2H4g02501 | LOC_Os04g38390 | Os04g0456700 | - | Detail |
| CX4g033427 | 4:19,587,490-19,589,404 | + | C1H4g13915 | C2H4g09656 | LOC_Os04g38400 | Os04g0456900 | - | Detail |
| CX4g032431 | 4:19,589,670-19,590,624 | - | C1H4g02678 | C2H4g04651 | LOC_Os04g38410 | Os04g0457000 | - | Detail |
| CX4g034532 | 4:19,591,555-19,593,938 | - | C1H4g15165 | C2H4g10829 | LOC_Os04g38420 | Os04g0457200 | - | Detail |
| CX4g033599 | 4:19,596,571-19,596,753 | + | - | - | - | - | - | Detail |
| CX4g034762 | 4:19,603,651-19,605,724 | + | C1H4g08631 | C2H4g26358 | LOC_Os04g38430 | Os04g0422300 | - | Detail |