| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24219 | 3:9,407,341-9,407,955 | + | C1H3g00497 | CX3g025566 | LOC_Os03g18990 | Os03g0301900 | - | Detail |
| C2H3g19658 | 3:9,410,763-9,411,527 | + | C1H3g25455 | - | LOC_Os03g19000 | Os03g0301950 | PEX11-2, OsPEX11-2, OsPEX11-5 | Detail |
| C2H3g01269 | 3:9,412,970-9,415,375 | + | C1H3g00671 | - | LOC_Os03g19010 | Os03g0302000 | PEX11-3, OsPEX11-3, OsPEX11 | Detail |
| C2H3g16033 | 3:9,416,864-9,420,075 | + | C1H3g25691 | CX3g029358 | LOC_Os03g19020 | Os03g0302200 | OsHIRP1 | Detail |
| C2H3g22160 | 3:9,425,813-9,426,652 | + | C1H3g01186 | CX3g025355 | LOC_Os03g19040 | Os03g0302500 | - | Detail |
| C2H3g04749 | 3:9,429,430-9,431,816 | + | C1H3g04602 | CX3g031208 | LOC_Os03g19059 | Os03g0302700 | - | Detail |
| C2H3g01569 | 3:9,433,708-9,434,355 | + | C1H3g22154 | CX3g027498 | LOC_Os03g19070 | Os03g0302800 | - | Detail |
| C2H3g02069 | 3:9,448,181-9,452,673 | + | C1H3g20481 | CX3g029770 | LOC_Os03g19080 | Os03g0302900 | SSD1 | Detail |
| C2H3g07365 | 3:9,456,527-9,457,600 | + | C1H3g20097 | CX3g030525 | LOC_Os03g19090 | Os03g0303100 | - | Detail |
| C2H3g09593 | 3:9,465,902-9,472,378 | - | C1H3g25874 | CX3g027281 | LOC_Os03g19120 | Os03g0303500 | OsP1 | Detail |
| C2H3g00606 | 3:9,492,656-9,493,476 | - | C1H3g30781 | CX3g028949 | LOC_Os03g19170 | Os03g0304100 | - | Detail |
| C2H3g12534 | 3:9,496,523-9,503,702 | + | C1H3g08647 | CX3g027589 | LOC_Os03g19190 | Os03g0304400 | - | Detail |
| C2H3g09070 | 3:9,516,974-9,520,456 | - | C1H3g21470 | CX3g026232 | LOC_Os03g19200 | Os03g0304500 | - | Detail |
| C2H3g20134 | 3:9,542,594-9,545,448 | - | C1H3g06043 | - | LOC_Os03g19220 | Os03g0304800 | - | Detail |
| C2H3g11777 | 3:9,555,282-9,559,401 | - | C1H3g10550 | CX3g026365 | LOC_Os03g19240 | Os03g0305000 | - | Detail |
| C2H3g17079 | 3:9,561,884-9,565,492 | - | C1H3g05747 | CX3g028640 | LOC_Os03g19250 | Os03g0305100 | - | Detail |
| C2H3g13465 | 3:9,570,078-9,570,716 | - | C1H3g00125 | CX3g029782 | LOC_Os03g19260 | Os03g0305200 | - | Detail |
| C2H3g28502 | 3:9,578,640-9,579,512 | - | C1H3g18796 | CX3g028201 | LOC_Os03g19270 | Os03g0305400 | OsUSP3 | Detail |
| C2H3g12913 | 3:9,582,082-9,586,519 | + | C1H3g22639 | CX3g030535 | LOC_Os03g19280 | Os03g0305500 | ASL1, OsASL1.2, OsASL1, OsAL1, red1 | Detail |
| C2H3g24123 | 3:9,587,286-9,588,648 | + | C1H3g06291 | CX3g026844 | LOC_Os03g19290 | Os03g0305600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036233 | 4:19,309,691-19,313,791 | + | C1H4g29968 | C2H4g28916 | LOC_Os04g37690 | Os04g0449900 | - | Detail |
| CX4g035205 | 4:19,320,919-19,321,677 | + | C1H4g22848 | C2H4g10266 | LOC_Os04g37700 | Os04g0450000 | - | Detail |
| CX4g035746 | 4:19,324,291-19,326,740 | + | C1H4g21347 | C2H4g25343 | LOC_Os04g37710 | Os04g0450100 | - | Detail |
| CX4g035241 | 4:19,327,631-19,330,184 | + | C1H4g17181 | C2H4g21043 | LOC_Os04g37720 | Os04g0450200 | - | Detail |
| CX4g034382 | 4:19,331,056-19,332,171 | + | C1H4g17435 | C2H4g13081 | LOC_Os04g37730 | Os04g0450300 | - | Detail |
| CX4g035154 | 4:19,338,411-19,339,673 | - | C1H4g17435 | C2H4g13668 | LOC_Os04g37740 | Os04g0450400 | - | Detail |
| CX4g036169 | 4:19,340,293-19,342,871 | + | C1H4g17618 | C2H4g09550 | LOC_Os04g37750 | Os04g0450500 | - | Detail |
| CX4g031477 | 4:19,344,357-19,345,268 | + | C1H4g09691 | C2H4g07891 | LOC_Os04g37760 | Os04g0450600 | - | Detail |
| CX4g033046 | 4:19,358,876-19,359,613 | + | C1H6g00179 | C2H6g03952 | LOC_Os03g27310 | Os04g0419600 | - | Detail |
| CX4g032253 | 4:19,362,396-19,364,107 | - | C1H4g03203 | C2H4g02103 | LOC_Os04g37790 | Os04g0450900 | - | Detail |
| CX4g033970 | 4:19,367,587-19,372,236 | + | C1H4g01696 | C2H4g27781 | LOC_Os04g37810 | Os04g0451100 | - | Detail |
| CX4g035607 | 4:19,376,365-19,377,922 | + | C1H4g14124 | C2H4g25963 | LOC_Os04g37820 | Os04g0451200 | - | Detail |
| CX4g035333 | 4:19,387,146-19,387,520 | + | - | C2H4g13346 | - | - | - | Detail |
| CX4g033061 | 4:19,392,626-19,392,892 | + | C1H4g10319 | C2H4g17860 | LOC_Os04g37880 | Os04g0451700 | - | Detail |
| CX4g032224 | 4:19,395,303-19,400,611 | - | C1H4g31154 | C2H4g19666 | LOC_Os04g37904 | Os04g0452000 | - | Detail |
| CX4g035297 | 4:19,410,337-19,413,879 | + | C1H4g12907 | C2H4g00200 | LOC_Os04g37920 | Os04g0452100 | OsCRY1b, CRY1b, CRY1 | Detail |
| CX4g036657 | 4:19,415,334-19,421,725 | - | C1H4g24033 | C2H4g29057 | LOC_Os04g37940 | Os04g0452300 | - | Detail |
| CX4g032560 | 4:19,423,250-19,429,542 | - | C1H4g29737 | C2H4g08692 | LOC_Os04g37950 | Os04g0452400 | - | Detail |
| CX4g035909 | 4:19,433,123-19,441,056 | + | C1H4g02254 | C2H4g06634 | LOC_Os04g37960 | Os04g0452500 | ZEP1 | Detail |
| CX4g033774 | 4:19,444,025-19,445,746 | + | C1H4g22749 | C2H4g14229 | LOC_Os04g37970 | Os04g0452600 | OsSTP14 | Detail |