| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30064 | 1:4,844,359-4,848,296 | - | C2H1g25446 | CX1g000033 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| C1H1g16523 | 1:4,877,117-4,878,002 | - | C2H1g03634 | CX1g002271 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| C1H1g23585 | 1:4,883,309-4,883,626 | - | C2H1g24699 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g14400 | 1:4,883,733-4,884,400 | - | C2H1g28525 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g15606 | 1:4,893,738-4,902,428 | - | C2H1g12459 | CX1g006928 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |
| C1H1g13227 | 1:4,913,013-4,914,395 | - | C2H1g19665 | CX1g003430 | LOC_Os01g10520 | Os01g0201800 | - | Detail |
| C1H1g22249 | 1:4,924,675-4,932,481 | - | C2H1g09694 | CX1g006334 | LOC_Os01g10530 | Os01g0201900 | - | Detail |
| C1H1g17903 | 1:4,967,422-4,968,687 | + | C2H1g26674 | CX1g001589 | LOC_Os01g10580 | Os01g0202500 | - | Detail |
| C1H1g18982 | 1:4,974,967-4,975,794 | + | C2H1g25575 | - | - | Os01g0202601 | - | Detail |
| C1H1g22813 | 1:4,981,388-4,984,579 | + | C2H1g11027 | CX1g006160 | LOC_Os01g10590 | Os01g0202700 | - | Detail |
| C1H1g30411 | 1:4,991,095-4,994,109 | - | C2H1g23331 | CX1g001315 | LOC_Os01g10600 | Os01g0202800 | OsNIP1;2 | Detail |
| C1H1g09441 | 1:4,995,564-4,997,839 | - | C2H1g21358 | CX1g005369 | LOC_Os01g10610 | Os01g0203000 | - | Detail |
| C1H1g13068 | 1:5,003,013-5,004,957 | - | C2H1g27421 | CX1g004390 | LOC_Os01g10630 | Os01g0203300 | - | Detail |
| C1H1g30796 | 1:5,043,175-5,047,575 | - | C2H1g16705 | CX1g005785 | LOC_Os01g10690 | Os01g0204000 | - | Detail |
| C1H1g01843 | 1:5,051,683-5,063,908 | - | C2H1g09104 | - | - | - | - | Detail |
| C1H1g24281 | 1:5,065,518-5,068,602 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g05818 | 1:5,070,855-5,074,344 | + | C2H1g00620 | - | - | - | - | Detail |
| C1H1g15430 | 1:5,079,327-5,082,999 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g01247 | 1:5,083,533-5,086,781 | - | C2H1g29778 | CX1g002344 | LOC_Os01g10800 | Os01g0205200 | - | Detail |
| C1H1g30346 | 1:5,087,144-5,088,059 | + | C2H1g24453 | CX1g004381 | LOC_Os01g10810 | Os01g0205300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036233 | 4:19,309,691-19,313,791 | + | C1H4g29968 | C2H4g28916 | LOC_Os04g37690 | Os04g0449900 | - | Detail |
| CX4g035205 | 4:19,320,919-19,321,677 | + | C1H4g22848 | C2H4g10266 | LOC_Os04g37700 | Os04g0450000 | - | Detail |
| CX4g035746 | 4:19,324,291-19,326,740 | + | C1H4g21347 | C2H4g25343 | LOC_Os04g37710 | Os04g0450100 | - | Detail |
| CX4g035241 | 4:19,327,631-19,330,184 | + | C1H4g17181 | C2H4g21043 | LOC_Os04g37720 | Os04g0450200 | - | Detail |
| CX4g034382 | 4:19,331,056-19,332,171 | + | C1H4g17435 | C2H4g13081 | LOC_Os04g37730 | Os04g0450300 | - | Detail |
| CX4g035154 | 4:19,338,411-19,339,673 | - | C1H4g17435 | C2H4g13668 | LOC_Os04g37740 | Os04g0450400 | - | Detail |
| CX4g036169 | 4:19,340,293-19,342,871 | + | C1H4g17618 | C2H4g09550 | LOC_Os04g37750 | Os04g0450500 | - | Detail |
| CX4g031477 | 4:19,344,357-19,345,268 | + | C1H4g09691 | C2H4g07891 | LOC_Os04g37760 | Os04g0450600 | - | Detail |
| CX4g033046 | 4:19,358,876-19,359,613 | + | C1H6g00179 | C2H6g03952 | LOC_Os03g27310 | Os04g0419600 | - | Detail |
| CX4g032253 | 4:19,362,396-19,364,107 | - | C1H4g03203 | C2H4g02103 | LOC_Os04g37790 | Os04g0450900 | - | Detail |
| CX4g033970 | 4:19,367,587-19,372,236 | + | C1H4g01696 | C2H4g27781 | LOC_Os04g37810 | Os04g0451100 | - | Detail |
| CX4g035607 | 4:19,376,365-19,377,922 | + | C1H4g14124 | C2H4g25963 | LOC_Os04g37820 | Os04g0451200 | - | Detail |
| CX4g035333 | 4:19,387,146-19,387,520 | + | - | C2H4g13346 | - | - | - | Detail |
| CX4g033061 | 4:19,392,626-19,392,892 | + | C1H4g10319 | C2H4g17860 | LOC_Os04g37880 | Os04g0451700 | - | Detail |
| CX4g032224 | 4:19,395,303-19,400,611 | - | C1H4g31154 | C2H4g19666 | LOC_Os04g37904 | Os04g0452000 | - | Detail |
| CX4g035297 | 4:19,410,337-19,413,879 | + | C1H4g12907 | C2H4g00200 | LOC_Os04g37920 | Os04g0452100 | OsCRY1b, CRY1b, CRY1 | Detail |
| CX4g036657 | 4:19,415,334-19,421,725 | - | C1H4g24033 | C2H4g29057 | LOC_Os04g37940 | Os04g0452300 | - | Detail |
| CX4g032560 | 4:19,423,250-19,429,542 | - | C1H4g29737 | C2H4g08692 | LOC_Os04g37950 | Os04g0452400 | - | Detail |
| CX4g035909 | 4:19,433,123-19,441,056 | + | C1H4g02254 | C2H4g06634 | LOC_Os04g37960 | Os04g0452500 | ZEP1 | Detail |
| CX4g033774 | 4:19,444,025-19,445,746 | + | C1H4g22749 | C2H4g14229 | LOC_Os04g37970 | Os04g0452600 | OsSTP14 | Detail |