| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g16451 | 6:9,565,443-9,572,739 | - | C2H6g22125 | CX6g041237 | LOC_Os06g20040 | Os06g0304600 | - | Detail |
| C1H6g08869 | 6:9,592,391-9,602,634 | + | C2H6g11429 | CX6g041532 | LOC_Os06g20090 | Os06g0305200 | - | Detail |
| C1H6g20121 | 6:9,603,797-9,605,031 | - | - | - | - | - | - | Detail |
| C1H6g11013 | 6:9,619,499-9,620,995 | + | C2H6g14592 | CX6g042324 | LOC_Os06g20110 | Os06g0305400 | - | Detail |
| C1H6g06042 | 6:9,622,456-9,624,509 | + | C2H6g07528 | CX6g042324 | LOC_Os06g20120 | Os06g0305400 | - | Detail |
| C1H6g25354 | 6:9,628,592-9,631,862 | + | C2H6g07470 | CX6g045687 | LOC_Os06g20140 | Os06g0118000 | - | Detail |
| C1H6g00755 | 6:9,638,057-9,638,511 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20180 | Os06g0306500 | - | Detail |
| C1H6g18397 | 6:9,640,476-9,645,548 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20190 | Os06g0306500 | - | Detail |
| C1H6g22866 | 6:9,678,289-9,679,067 | + | - | - | - | - | - | Detail |
| C1H6g10015 | 6:9,684,050-9,686,449 | - | C2H6g20586 | CX6g043850 | LOC_Os06g21920 | Os06g0324800 | PT9, OsPT9, PHT1-9, OsPht1;9 | Detail |
| C1H6g02709 | 6:9,694,762-9,695,096 | + | C2H6g00738 | CX6g042175 | LOC_Os06g21910 | Os06g0324400 | - | Detail |
| C1H6g04429 | 6:9,704,253-9,708,011 | - | C2H6g18039 | CX6g045787 | LOC_Os06g21900 | Os06g0324300 | - | Detail |
| C1H6g19731 | 6:9,764,813-9,766,491 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21820 | Os06g0323100 | - | Detail |
| C1H6g31747 | 6:9,795,947-9,797,603 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21720 | Os06g0322400 | - | Detail |
| C1H6g09993 | 6:9,861,008-9,866,744 | + | C2H6g15965 | CX6g043034 | LOC_Os06g21600 | Os06g0320700 | - | Detail |
| C1H6g29854 | 6:9,869,699-9,871,226 | - | C2H6g07045 | CX6g043863 | LOC_Os06g21590 | Os06g0320500 | - | Detail |
| C1H6g30433 | 6:9,872,942-9,874,529 | + | - | - | - | - | - | Detail |
| C1H6g15151 | 6:9,884,288-9,888,894 | + | C2H6g13117 | CX6g043671 | LOC_Os06g21570 | Os06g0320200 | Os6BGlu24 | Detail |
| C1H6g07888 | 6:9,889,277-9,892,648 | - | C2H6g00743 | CX6g044452 | LOC_Os06g21560 | Os06g0320100 | - | Detail |
| C1H6g14935 | 6:9,895,203-9,895,714 | + | C2H6g30426 | CX6g045633 | LOC_Os06g21550 | Os06g0320000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036233 | 4:19,309,691-19,313,791 | + | C1H4g29968 | C2H4g28916 | LOC_Os04g37690 | Os04g0449900 | - | Detail |
| CX4g035205 | 4:19,320,919-19,321,677 | + | C1H4g22848 | C2H4g10266 | LOC_Os04g37700 | Os04g0450000 | - | Detail |
| CX4g035746 | 4:19,324,291-19,326,740 | + | C1H4g21347 | C2H4g25343 | LOC_Os04g37710 | Os04g0450100 | - | Detail |
| CX4g035241 | 4:19,327,631-19,330,184 | + | C1H4g17181 | C2H4g21043 | LOC_Os04g37720 | Os04g0450200 | - | Detail |
| CX4g034382 | 4:19,331,056-19,332,171 | + | C1H4g17435 | C2H4g13081 | LOC_Os04g37730 | Os04g0450300 | - | Detail |
| CX4g035154 | 4:19,338,411-19,339,673 | - | C1H4g17435 | C2H4g13668 | LOC_Os04g37740 | Os04g0450400 | - | Detail |
| CX4g036169 | 4:19,340,293-19,342,871 | + | C1H4g17618 | C2H4g09550 | LOC_Os04g37750 | Os04g0450500 | - | Detail |
| CX4g031477 | 4:19,344,357-19,345,268 | + | C1H4g09691 | C2H4g07891 | LOC_Os04g37760 | Os04g0450600 | - | Detail |
| CX4g033046 | 4:19,358,876-19,359,613 | + | C1H6g00179 | C2H6g03952 | LOC_Os03g27310 | Os04g0419600 | - | Detail |
| CX4g032253 | 4:19,362,396-19,364,107 | - | C1H4g03203 | C2H4g02103 | LOC_Os04g37790 | Os04g0450900 | - | Detail |
| CX4g033970 | 4:19,367,587-19,372,236 | + | C1H4g01696 | C2H4g27781 | LOC_Os04g37810 | Os04g0451100 | - | Detail |
| CX4g035607 | 4:19,376,365-19,377,922 | + | C1H4g14124 | C2H4g25963 | LOC_Os04g37820 | Os04g0451200 | - | Detail |
| CX4g035333 | 4:19,387,146-19,387,520 | + | - | C2H4g13346 | - | - | - | Detail |
| CX4g033061 | 4:19,392,626-19,392,892 | + | C1H4g10319 | C2H4g17860 | LOC_Os04g37880 | Os04g0451700 | - | Detail |
| CX4g032224 | 4:19,395,303-19,400,611 | - | C1H4g31154 | C2H4g19666 | LOC_Os04g37904 | Os04g0452000 | - | Detail |
| CX4g035297 | 4:19,410,337-19,413,879 | + | C1H4g12907 | C2H4g00200 | LOC_Os04g37920 | Os04g0452100 | OsCRY1b, CRY1b, CRY1 | Detail |
| CX4g036657 | 4:19,415,334-19,421,725 | - | C1H4g24033 | C2H4g29057 | LOC_Os04g37940 | Os04g0452300 | - | Detail |
| CX4g032560 | 4:19,423,250-19,429,542 | - | C1H4g29737 | C2H4g08692 | LOC_Os04g37950 | Os04g0452400 | - | Detail |
| CX4g035909 | 4:19,433,123-19,441,056 | + | C1H4g02254 | C2H4g06634 | LOC_Os04g37960 | Os04g0452500 | ZEP1 | Detail |
| CX4g033774 | 4:19,444,025-19,445,746 | + | C1H4g22749 | C2H4g14229 | LOC_Os04g37970 | Os04g0452600 | OsSTP14 | Detail |