| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19435 | 4:22,521,930-22,525,097 | + | C1H4g14520 | CX4g031957 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| C2H4g18486 | 4:22,525,268-22,525,756 | - | - | - | - | Os04g0521900 | - | Detail |
| C2H4g20077 | 4:22,534,017-22,534,349 | + | C1H4g13540 | CX4g034351 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| C2H4g17950 | 4:22,544,733-22,545,482 | - | C1H4g14130 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g23320 | 4:22,547,687-22,548,330 | - | C1H4g20746 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g07715 | 4:22,569,851-22,572,962 | + | C1H4g23550 | CX4g032754 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| C2H4g09820 | 4:22,574,353-22,575,002 | + | C1H4g25974 | CX4g032876 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| C2H4g17435 | 4:22,575,109-22,580,142 | - | C1H4g18322 | CX4g032188 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| C2H4g30482 | 4:22,586,419-22,588,702 | - | C1H4g27685 | CX4g033622 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| C2H4g08365 | 4:22,590,483-22,590,956 | - | C1H4g26193 | CX4g033622 | LOC_Os04g44220 | Os04g0523350 | - | Detail |
| C2H4g19772 | 4:22,595,491-22,595,874 | - | - | CX4g035364 | - | - | - | Detail |
| C2H4g21642 | 4:22,598,615-22,604,413 | + | C1H4g02749 | CX4g033677 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| C2H4g25107 | 4:22,607,303-22,608,808 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44240 | Os04g0523600 | - | Detail |
| C2H4g28789 | 4:22,611,650-22,615,059 | - | C1H4g13330 | - | LOC_Os04g51490 | Os04g0132900 | - | Detail |
| C2H4g13084 | 4:22,618,354-22,620,895 | - | C1H4g19013 | CX4g035815 | LOC_Os01g62100 | - | - | Detail |
| C2H4g14631 | 4:22,624,546-22,626,720 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44250 | Os04g0523600 | - | Detail |
| C2H4g00229 | 4:22,627,770-22,628,705 | + | - | - | LOC_Os04g44260 | Os04g0524136 | - | Detail |
| C2H4g21424 | 4:22,634,411-22,635,207 | + | C1H4g20304 | CX4g035143 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| C2H4g00588 | 4:22,658,904-22,661,183 | + | C1H4g10194 | CX4g034041 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| C2H4g16476 | 4:22,662,716-22,666,298 | - | C1H4g06080 | CX4g031624 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035240 | 4:19,206,016-19,206,483 | + | C1H4g10412 | C2H4g10663 | LOC_Os04g37500 | Os04g0447800 | OsGAD2 | Detail |
| CX4g034935 | 4:19,206,957-19,207,568 | - | C1H4g03454 | C2H4g00976 | LOC_Os04g37510 | Os04g0447900 | - | Detail |
| CX4g032313 | 4:19,209,261-19,211,350 | + | C1H4g15297 | C2H4g26971 | LOC_Os04g37520 | Os04g0448000 | - | Detail |
| CX4g035994 | 4:19,212,071-19,212,874 | - | - | C2H4g19497 | LOC_Os04g37530 | Os04g0448100 | OsSIDP301 | Detail |
| CX4g034328 | 4:19,216,406-19,220,947 | + | C1H4g11503 | C2H4g24483 | LOC_Os04g37540 | Os04g0448200 | - | Detail |
| CX4g032172 | 4:19,222,909-19,224,273 | + | C1H4g29726 | C2H4g30010 | LOC_Os04g37550 | Os04g0448300 | - | Detail |
| CX4g032857 | 4:19,237,328-19,238,704 | + | C1H4g15301 | C2H4g00741 | LOC_Os04g37570 | Os04g0448500 | OsAP37 | Detail |
| CX4g031559 | 4:19,239,037-19,241,262 | - | C1H4g19386 | C2H4g17555 | LOC_Os04g37580 | Os04g0448600 | - | Detail |
| CX4g033820 | 4:19,242,136-19,242,627 | - | C1H4g09481 | C2H4g20353 | LOC_Os04g37590 | Os04g0448700 | - | Detail |
| CX4g034907 | 4:19,245,641-19,246,063 | + | - | - | - | Os04g0362501 | - | Detail |
| CX4g035815 | 4:19,247,130-19,251,605 | + | C1H4g28096 | C2H4g13084 | - | - | - | Detail |
| CX4g035446 | 4:19,255,116-19,255,823 | - | C1H4g11529 | C2H4g10467 | LOC_Os04g37590 | Os04g0448700 | - | Detail |
| CX4g031370 | 4:19,266,379-19,270,575 | + | C1H4g24442 | C2H4g04156 | LOC_Os04g37619 | Os04g0448950 | - | Detail |
| CX4g034821 | 4:19,273,841-19,275,730 | - | C1H4g00476 | C2H4g00166 | LOC_Os04g37640 | Os04g0449100 | - | Detail |
| CX4g034100 | 4:19,280,127-19,282,179 | - | C1H4g27038 | C2H4g03926 | LOC_Os04g37650 | Os04g0449200 | - | Detail |
| CX4g032674 | 4:19,283,121-19,283,413 | + | C1H7g27141 | C2H4g24787 | - | - | - | Detail |
| CX4g031673 | 4:19,285,787-19,289,661 | - | C1H4g08983 | C2H4g27832 | LOC_Os04g37660 | Os04g0449400 | OsPP65 | Detail |
| CX4g031811 | 4:19,292,601-19,297,048 | - | C1H4g25897 | C2H4g17154 | LOC_Os04g37670 | Os04g0449500 | - | Detail |
| CX4g031719 | 4:19,298,442-19,298,597 | + | - | - | - | - | - | Detail |
| CX4g032225 | 4:19,303,784-19,304,875 | + | - | C2H4g17736 | LOC_Os02g54790 | Os02g0789700 | - | Detail |