| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g18962 | 5:12,540,821-12,542,672 | - | C1H5g00809 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C2H5g16379 | 5:12,560,833-12,561,348 | + | C1H5g07771 | CX5g040926 | LOC_Os05g25600 | - | - | Detail |
| C2H5g17208 | 5:12,564,172-12,565,033 | + | C1H5g18434 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C2H5g12884 | 5:12,571,540-12,575,563 | - | C1H5g29408 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C2H5g23272 | 5:12,622,131-12,622,888 | + | C1H5g31853 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C2H5g30247 | 5:12,623,482-12,626,593 | + | C1H5g21190 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C2H5g20457 | 5:12,642,054-12,643,214 | + | C1H5g09562 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C2H5g00966 | 5:12,649,272-12,652,168 | + | C1H5g20684 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C2H5g05199 | 5:12,658,867-12,659,098 | - | - | CX5g040463 | - | - | - | Detail |
| C2H5g12832 | 5:12,659,126-12,659,341 | - | C1H5g15138 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C2H5g27944 | 5:12,666,481-12,670,358 | + | C1H5g03510 | - | - | - | - | Detail |
| C2H5g23193 | 5:12,666,616-12,670,222 | - | C1H5g02171 | CX5g037938 | LOC_Os05g25320 | Os05g0475600 | - | Detail |
| C2H5g25840 | 5:12,682,852-12,686,503 | + | C1H5g07569 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C2H5g02562 | 5:12,687,807-12,692,024 | + | C1H5g09336 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C2H5g29319 | 5:12,693,761-12,695,203 | + | C1H5g18365 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g21674 | 5:12,722,634-12,724,518 | + | C1H5g16408 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C2H5g11879 | 5:12,724,950-12,726,343 | + | C1H5g24963 | CX5g039314 | LOC_Os05g25170 | - | - | Detail |
| C2H5g22294 | 5:12,730,462-12,732,138 | + | C1H5g19700 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g05113 | 5:12,732,485-12,735,940 | - | C1H5g26142 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C2H5g27623 | 5:12,768,072-12,770,998 | - | C1H5g16305 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036663 | 4:19,093,278-19,094,516 | + | C1H4g08917 | C2H4g17377 | LOC_Os04g36790 | Os04g0445600 | - | Detail |
| CX4g036306 | 4:19,096,492-19,100,266 | - | C1H4g17080 | C2H4g16998 | LOC_Os04g36800 | Os04g0445700 | - | Detail |
| CX4g033224 | 4:19,104,871-19,105,981 | + | C1H4g30441 | C2H4g01997 | LOC_Os04g36810 | Os04g0445800 | - | Detail |
| CX4g034787 | 4:19,108,164-19,108,748 | - | - | - | - | - | - | Detail |
| CX4g036550 | 4:19,111,846-19,112,007 | - | - | - | - | - | - | Detail |
| CX4g032205 | 4:19,115,293-19,117,346 | + | C1H4g05743 | C2H4g15595 | LOC_Os04g36830 | Os04g0446000 | - | Detail |
| CX4g032791 | 4:19,119,141-19,120,799 | - | C1H4g05899 | C2H4g09803 | LOC_Os04g36840 | Os04g0446100 | - | Detail |
| CX4g035934 | 4:19,123,839-19,126,049 | + | C1H4g25812 | C2H4g00123 | LOC_Os04g36850 | Os04g0446200 | - | Detail |
| CX4g033038 | 4:19,127,039-19,129,756 | - | C1H4g22842 | C2H4g15373 | LOC_Os04g36859 | Os04g0446300 | - | Detail |
| CX4g033684 | 4:19,134,740-19,135,240 | - | - | C2H4g30612 | - | Os04g0446401 | - | Detail |
| CX4g034836 | 4:19,136,670-19,140,410 | + | C1H4g15722 | C2H4g05616 | LOC_Os04g36890 | Os04g0446500 | - | Detail |
| CX4g032071 | 4:19,143,881-19,144,210 | - | C1H4g29772 | C2H4g24683 | LOC_Os04g36910 | - | - | Detail |
| CX4g031740 | 4:19,148,390-19,150,210 | + | C1H4g24047 | C2H4g15235 | LOC_Os04g39000 | Os04g0477200 | - | Detail |
| CX4g035903 | 4:19,181,731-19,185,750 | + | C1H4g31241 | C2H4g17395 | LOC_Os04g37430 | Os04g0447100 | SPH | Detail |
| CX4g034708 | 4:19,186,701-19,186,853 | + | - | - | - | - | - | Detail |
| CX4g032826 | 4:19,188,286-19,190,175 | - | C1H4g28115 | C2H4g08055 | LOC_Os04g37460 | Os04g0447400 | - | Detail |
| CX4g036423 | 4:19,190,639-19,193,204 | + | C1H4g16514 | C2H4g00082 | LOC_Os04g37470 | Os04g0447500 | - | Detail |
| CX4g031955 | 4:19,194,033-19,197,668 | + | C1H4g20692 | C2H4g04455 | LOC_Os04g37480 | Os04g0447600 | - | Detail |
| CX4g034192 | 4:19,198,317-19,200,834 | + | C1H4g16860 | C2H4g06514 | LOC_Os04g37490 | Os04g0447700 | - | Detail |
| CX4g036084 | 4:19,203,178-19,204,570 | + | C1H4g11216 | C2H4g00146 | LOC_Os04g37500 | Os04g0447800 | OsGAD2 | Detail |