| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18815 | 2:22,964,531-22,973,156 | - | C1H2g02429 | CX2g019377 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| C2H2g29974 | 2:22,984,697-22,984,957 | - | - | - | - | - | - | Detail |
| C2H2g26929 | 2:22,988,593-22,990,462 | + | C1H2g22582 | - | LOC_Os02g40490 | - | - | Detail |
| C2H2g04756 | 2:22,994,675-22,996,352 | + | C1H2g02238 | CX2g024840 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| C2H2g05107 | 2:22,997,619-23,000,421 | + | C1H2g04978 | CX2g024264 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| C2H2g25708 | 2:23,002,033-23,003,523 | - | C1H2g16546 | - | LOC_Os02g40514 | Os02g0618250 | - | Detail |
| C2H2g01262 | 2:23,008,365-23,009,939 | - | C1H2g01139 | CX2g019264 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| C2H2g01838 | 2:23,025,294-23,026,795 | + | C1H2g19268 | CX2g024894 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| C2H2g30582 | 2:23,043,425-23,044,159 | - | - | - | LOC_Os02g40600 | - | - | Detail |
| C2H2g02169 | 2:23,070,406-23,075,582 | - | C1H2g16057 | CX2g023988 | LOC_Os02g40664 | Os02g0619600 | - | Detail |
| C2H2g26987 | 2:23,075,966-23,077,800 | + | C1H2g04094 | - | - | - | - | Detail |
| C2H2g19869 | 2:23,080,364-23,080,630 | - | - | - | - | - | - | Detail |
| C2H2g18142 | 2:23,088,767-23,092,303 | + | C1H2g31349 | CX2g019895 | LOC_Os02g40680 | Os02g0620100 | - | Detail |
| C2H2g10513 | 2:23,093,099-23,093,482 | + | C1H2g31349 | CX2g020219 | LOC_Os02g40690 | Os02g0620200 | - | Detail |
| C2H2g22522 | 2:23,099,083-23,099,503 | + | C1H2g24265 | CX2g023588 | LOC_Os02g40700 | Os02g0620400 | - | Detail |
| C2H2g07540 | 2:23,105,722-23,107,218 | + | C1H2g23096 | CX2g024155 | LOC_Os02g40710 | Os02g0620500 | OsAMT1;3 | Detail |
| C2H2g29061 | 2:23,111,389-23,115,393 | + | C1H2g17359 | CX2g024932 | LOC_Os02g40730 | Os02g0620600 | AMT1;2, OsAMT1;2, AMT1-2, Osamt1-3, "OsAMT1, 3", OsAMT1;3, OsAMT1.3, OsAMT1.2 | Detail |
| C2H2g23641 | 2:23,118,462-23,120,057 | - | C1H2g17305 | CX2g024918 | LOC_Os02g40750 | Os02g0769900 | - | Detail |
| C2H2g07915 | 2:23,128,520-23,133,173 | - | - | - | - | - | - | Detail |
| C2H2g25432 | 2:23,136,851-23,144,033 | + | C1H2g09682 | CX2g022252 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036663 | 4:19,093,278-19,094,516 | + | C1H4g08917 | C2H4g17377 | LOC_Os04g36790 | Os04g0445600 | - | Detail |
| CX4g036306 | 4:19,096,492-19,100,266 | - | C1H4g17080 | C2H4g16998 | LOC_Os04g36800 | Os04g0445700 | - | Detail |
| CX4g033224 | 4:19,104,871-19,105,981 | + | C1H4g30441 | C2H4g01997 | LOC_Os04g36810 | Os04g0445800 | - | Detail |
| CX4g034787 | 4:19,108,164-19,108,748 | - | - | - | - | - | - | Detail |
| CX4g036550 | 4:19,111,846-19,112,007 | - | - | - | - | - | - | Detail |
| CX4g032205 | 4:19,115,293-19,117,346 | + | C1H4g05743 | C2H4g15595 | LOC_Os04g36830 | Os04g0446000 | - | Detail |
| CX4g032791 | 4:19,119,141-19,120,799 | - | C1H4g05899 | C2H4g09803 | LOC_Os04g36840 | Os04g0446100 | - | Detail |
| CX4g035934 | 4:19,123,839-19,126,049 | + | C1H4g25812 | C2H4g00123 | LOC_Os04g36850 | Os04g0446200 | - | Detail |
| CX4g033038 | 4:19,127,039-19,129,756 | - | C1H4g22842 | C2H4g15373 | LOC_Os04g36859 | Os04g0446300 | - | Detail |
| CX4g033684 | 4:19,134,740-19,135,240 | - | - | C2H4g30612 | - | Os04g0446401 | - | Detail |
| CX4g034836 | 4:19,136,670-19,140,410 | + | C1H4g15722 | C2H4g05616 | LOC_Os04g36890 | Os04g0446500 | - | Detail |
| CX4g032071 | 4:19,143,881-19,144,210 | - | C1H4g29772 | C2H4g24683 | LOC_Os04g36910 | - | - | Detail |
| CX4g031740 | 4:19,148,390-19,150,210 | + | C1H4g24047 | C2H4g15235 | LOC_Os04g39000 | Os04g0477200 | - | Detail |
| CX4g035903 | 4:19,181,731-19,185,750 | + | C1H4g31241 | C2H4g17395 | LOC_Os04g37430 | Os04g0447100 | SPH | Detail |
| CX4g034708 | 4:19,186,701-19,186,853 | + | - | - | - | - | - | Detail |
| CX4g032826 | 4:19,188,286-19,190,175 | - | C1H4g28115 | C2H4g08055 | LOC_Os04g37460 | Os04g0447400 | - | Detail |
| CX4g036423 | 4:19,190,639-19,193,204 | + | C1H4g16514 | C2H4g00082 | LOC_Os04g37470 | Os04g0447500 | - | Detail |
| CX4g031955 | 4:19,194,033-19,197,668 | + | C1H4g20692 | C2H4g04455 | LOC_Os04g37480 | Os04g0447600 | - | Detail |
| CX4g034192 | 4:19,198,317-19,200,834 | + | C1H4g16860 | C2H4g06514 | LOC_Os04g37490 | Os04g0447700 | - | Detail |
| CX4g036084 | 4:19,203,178-19,204,570 | + | C1H4g11216 | C2H4g00146 | LOC_Os04g37500 | Os04g0447800 | OsGAD2 | Detail |