| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17879 | 2:8,415,095-8,417,968 | - | C2H2g08854 | CX2g020140 | LOC_Os02g15760 | Os02g0257500 | OsSPCH2 | Detail |
| C1H2g13138 | 2:8,440,752-8,440,994 | - | - | - | - | - | - | Detail |
| C1H2g10499 | 2:8,450,606-8,455,969 | - | - | - | LOC_Os02g15790 | - | - | Detail |
| C1H2g24912 | 2:8,460,479-8,460,907 | + | - | CX2g019754 | LOC_Os02g15800 | Os02g0258000 | - | Detail |
| C1H2g08552 | 2:8,479,979-8,481,684 | - | C2H2g26210 | CX2g020807 | LOC_Os02g15810 | Os02g0258200 | - | Detail |
| C1H2g19748 | 2:8,482,646-8,483,071 | + | C2H1g29748 | CX2g022355 | - | Os02g0187700 | Os2R_MYB22 | Detail |
| C1H2g01345 | 2:8,484,414-8,489,802 | - | C2H2g14268 | CX2g021130 | LOC_Os02g15820 | Os02g0258300 | - | Detail |
| C1H2g29798 | 2:8,513,049-8,513,324 | + | C2H2g28678 | CX2g024305 | LOC_Os02g15860 | Os02g0258800 | - | Detail |
| C1H2g20084 | 2:8,516,059-8,519,540 | - | C2H2g14628 | CX2g022221 | LOC_Os02g15870 | Os02g0258900 | - | Detail |
| C1H2g13918 | 2:8,522,755-8,524,650 | - | - | CX2g020163 | LOC_Os02g15880 | Os02g0259100 | - | Detail |
| C1H2g15544 | 2:8,543,405-8,545,255 | - | C2H2g14089 | CX2g024280 | LOC_Os02g15900 | Os02g0259600 | - | Detail |
| C1H2g10789 | 2:8,551,763-8,552,161 | + | - | - | - | - | - | Detail |
| C1H2g04256 | 2:8,554,093-8,560,341 | + | C2H2g22829 | CX2g024539 | LOC_Os02g15930 | Os02g0259850 | - | Detail |
| C1H2g03338 | 2:8,578,273-8,580,594 | + | C2H2g09217 | CX2g022291 | LOC_Os02g15950 | Os02g0260200 | EP3, LP | Detail |
| C1H2g02864 | 2:8,601,861-8,605,657 | - | C2H2g12926 | CX2g021533 | LOC_Os02g15970 | Os02g0260400 | - | Detail |
| C1H2g27751 | 2:8,614,036-8,617,836 | + | C2H2g06594 | CX2g022911 | LOC_Os02g15980 | Os02g0260500 | - | Detail |
| C1H2g12308 | 2:8,623,315-8,628,321 | + | C2H2g13675 | CX2g024506 | LOC_Os02g16000 | Os02g0260700 | - | Detail |
| C1H2g28079 | 2:8,636,613-8,640,704 | + | C2H2g11255 | CX2g022743 | LOC_Os02g16030 | Os02g0261000 | - | Detail |
| C1H2g29991 | 2:8,644,610-8,649,650 | + | C2H2g01960 | CX2g019327 | LOC_Os02g16040 | Os02g0261100 | UBC5B, OsUBC5b, OsUBC15, UBC15 | Detail |
| C1H2g07409 | 2:8,669,727-8,671,447 | + | C2H2g29016 | CX2g022234 | LOC_Os02g16270 | Os02g0262800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036663 | 4:19,093,278-19,094,516 | + | C1H4g08917 | C2H4g17377 | LOC_Os04g36790 | Os04g0445600 | - | Detail |
| CX4g036306 | 4:19,096,492-19,100,266 | - | C1H4g17080 | C2H4g16998 | LOC_Os04g36800 | Os04g0445700 | - | Detail |
| CX4g033224 | 4:19,104,871-19,105,981 | + | C1H4g30441 | C2H4g01997 | LOC_Os04g36810 | Os04g0445800 | - | Detail |
| CX4g034787 | 4:19,108,164-19,108,748 | - | - | - | - | - | - | Detail |
| CX4g036550 | 4:19,111,846-19,112,007 | - | - | - | - | - | - | Detail |
| CX4g032205 | 4:19,115,293-19,117,346 | + | C1H4g05743 | C2H4g15595 | LOC_Os04g36830 | Os04g0446000 | - | Detail |
| CX4g032791 | 4:19,119,141-19,120,799 | - | C1H4g05899 | C2H4g09803 | LOC_Os04g36840 | Os04g0446100 | - | Detail |
| CX4g035934 | 4:19,123,839-19,126,049 | + | C1H4g25812 | C2H4g00123 | LOC_Os04g36850 | Os04g0446200 | - | Detail |
| CX4g033038 | 4:19,127,039-19,129,756 | - | C1H4g22842 | C2H4g15373 | LOC_Os04g36859 | Os04g0446300 | - | Detail |
| CX4g033684 | 4:19,134,740-19,135,240 | - | - | C2H4g30612 | - | Os04g0446401 | - | Detail |
| CX4g034836 | 4:19,136,670-19,140,410 | + | C1H4g15722 | C2H4g05616 | LOC_Os04g36890 | Os04g0446500 | - | Detail |
| CX4g032071 | 4:19,143,881-19,144,210 | - | C1H4g29772 | C2H4g24683 | LOC_Os04g36910 | - | - | Detail |
| CX4g031740 | 4:19,148,390-19,150,210 | + | C1H4g24047 | C2H4g15235 | LOC_Os04g39000 | Os04g0477200 | - | Detail |
| CX4g035903 | 4:19,181,731-19,185,750 | + | C1H4g31241 | C2H4g17395 | LOC_Os04g37430 | Os04g0447100 | SPH | Detail |
| CX4g034708 | 4:19,186,701-19,186,853 | + | - | - | - | - | - | Detail |
| CX4g032826 | 4:19,188,286-19,190,175 | - | C1H4g28115 | C2H4g08055 | LOC_Os04g37460 | Os04g0447400 | - | Detail |
| CX4g036423 | 4:19,190,639-19,193,204 | + | C1H4g16514 | C2H4g00082 | LOC_Os04g37470 | Os04g0447500 | - | Detail |
| CX4g031955 | 4:19,194,033-19,197,668 | + | C1H4g20692 | C2H4g04455 | LOC_Os04g37480 | Os04g0447600 | - | Detail |
| CX4g034192 | 4:19,198,317-19,200,834 | + | C1H4g16860 | C2H4g06514 | LOC_Os04g37490 | Os04g0447700 | - | Detail |
| CX4g036084 | 4:19,203,178-19,204,570 | + | C1H4g11216 | C2H4g00146 | LOC_Os04g37500 | Os04g0447800 | OsGAD2 | Detail |