| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27366 | 3:25,593,481-25,596,090 | + | C2H3g13044 | CX3g027834 | LOC_Os03g48010 | Os03g0684500 | - | Detail |
| C1H3g15233 | 3:25,596,794-25,598,680 | - | C2H3g22552 | CX3g025275 | LOC_Os03g48030 | Os03g0684700 | - | Detail |
| C1H3g05365 | 3:25,602,648-25,604,750 | + | C2H3g24042 | CX3g030044 | LOC_Os03g48040 | Os03g0685000 | OsFdC2, OsHDY1 | Detail |
| C1H3g13814 | 3:25,608,977-25,611,480 | + | C2H3g04933 | CX3g026303 | LOC_Os03g48050 | Os03g0685100 | - | Detail |
| C1H3g01967 | 3:25,628,711-25,631,971 | + | C2H3g27897 | CX3g027858 | LOC_Os03g48060 | Os03g0685300 | FLO19 | Detail |
| C1H3g16679 | 3:25,637,779-25,641,456 | - | C2H3g26335 | CX3g028901 | LOC_Os03g48080 | Os03g0685500 | - | Detail |
| C1H3g01229 | 3:25,641,900-25,645,954 | - | C2H3g24853 | CX3g029151 | LOC_Os03g48090 | Os03g0685600 | - | Detail |
| C1H3g02003 | 3:25,645,977-25,646,372 | - | C2H3g18835 | - | - | - | - | Detail |
| C1H3g30763 | 3:25,646,548-25,659,506 | + | C2H3g08146 | CX3g027759 | - | - | - | Detail |
| C1H3g16754 | 3:25,660,235-25,660,525 | + | - | - | LOC_Os03g48110 | Os03g0685900 | - | Detail |
| C1H3g31689 | 3:25,666,295-25,679,368 | - | C2H3g06193 | CX3g025545 | LOC_Os03g48140 | Os03g0686300 | - | Detail |
| C1H3g17077 | 3:25,685,933-25,689,140 | + | C2H3g15650 | CX3g025241 | LOC_Os03g48160 | Os03g0253100 | - | Detail |
| C1H3g31064 | 3:25,690,701-25,695,188 | + | C2H3g12008 | CX3g025276 | LOC_Os03g48170 | Os03g0686900 | FLO6 | Detail |
| C1H3g04074 | 3:25,695,859-25,701,417 | - | C2H3g19404 | CX3g025668 | LOC_Os03g51050 | Os03g0687000 | OsNPF2.4, NPF2.4, OsPTR2, PTR2 | Detail |
| C1H3g27780 | 3:25,713,193-25,717,194 | - | C2H3g17935 | CX3g029198 | LOC_Os03g48190 | Os03g0687200 | - | Detail |
| C1H3g31647 | 3:25,721,830-25,722,576 | - | C2H3g13078 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C1H3g02479 | 3:25,724,849-25,725,295 | - | C2H3g02466 | CX3g025750 | LOC_Os03g48225 | Os03g0687800 | - | Detail |
| C1H3g12014 | 3:25,727,294-25,728,022 | - | C2H3g05793 | CX3g028579 | LOC_Os03g48235 | Os03g0688000 | - | Detail |
| C1H3g12256 | 3:25,730,050-25,730,676 | - | C2H3g06136 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C1H3g24497 | 3:25,732,258-25,737,184 | + | C2H3g19874 | CX3g029090 | LOC_Os03g48260 | Os03g0688200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036322 | 4:18,954,812-18,955,242 | - | C1H4g12484 | C2H4g10027 | LOC_Os02g35315 | Os04g0443801 | - | Detail |
| CX4g032651 | 4:18,957,163-18,959,030 | - | C1H4g12445 | C2H4g18187 | LOC_Os04g43560 | Os04g0536500 | - | Detail |
| CX4g035373 | 4:18,968,944-18,973,082 | - | C1H4g10795 | C2H4g06964 | LOC_Os04g46620 | Os04g0443900 | - | Detail |
| CX4g034155 | 4:18,973,559-18,974,281 | - | - | - | - | Os04g0443951 | - | Detail |
| CX4g031406 | 4:18,990,022-18,990,768 | - | - | - | - | Os04g0444050 | - | Detail |
| CX4g031398 | 4:18,995,521-19,000,448 | + | C1H4g01511 | C2H4g00367 | LOC_Os04g36660 | Os04g0444200 | - | Detail |
| CX4g032129 | 4:19,015,363-19,015,881 | + | - | C2H4g16468 | LOC_Os04g36670 | Os04g0444300 | OsARGOS | Detail |
| CX4g032495 | 4:19,017,319-19,021,799 | - | C1H4g01464 | C2H4g21834 | LOC_Os04g36680 | Os04g0444400 | - | Detail |
| CX4g035262 | 4:19,024,872-19,027,251 | + | C1H4g10961 | C2H4g14271 | LOC_Os04g36700 | Os04g0444600 | - | Detail |
| CX4g032233 | 4:19,041,392-19,047,093 | + | C1H4g02574 | C2H4g22232 | LOC_Os04g36720 | Os04g0444800 | - | Detail |
| CX4g035751 | 4:19,055,146-19,059,052 | + | C1H4g19141 | C2H4g01316 | LOC_Os04g36720 | Os04g0444800 | - | Detail |
| CX4g033534 | 4:19,060,839-19,063,138 | + | C1H4g01276 | C2H4g08818 | LOC_Os04g36730 | Os04g0444900 | - | Detail |
| CX4g035720 | 4:19,063,730-19,066,151 | - | C1H4g22503 | C2H4g11016 | LOC_Os04g36740 | Os04g0445000 | OsSKOR | Detail |
| CX4g033595 | 4:19,068,628-19,069,916 | - | C1H4g28185 | C2H4g13134 | LOC_Os04g36740 | - | - | Detail |
| CX4g032940 | 4:19,073,112-19,073,510 | - | - | - | - | - | - | Detail |
| CX4g034541 | 4:19,075,809-19,076,240 | + | - | C2H4g30174 | LOC_Os04g36750 | Os04g0445100 | - | Detail |
| CX4g034748 | 4:19,076,639-19,077,061 | - | - | C2H4g07739 | - | Os04g0478000 | - | Detail |
| CX4g031649 | 4:19,079,488-19,080,030 | - | C1H4g21010 | C2H4g28013 | LOC_Os04g36760 | Os04g0445200 | - | Detail |
| CX4g032135 | 4:19,081,230-19,081,799 | + | - | C2H4g27220 | LOC_Os04g36770 | Os04g0445300 | OsPMEI18 | Detail |
| CX4g036200 | 4:19,082,975-19,084,132 | + | C1H4g28209 | C2H4g12496 | LOC_Os04g36780 | Os04g0445400 | - | Detail |