| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g22410 | 3:9,653,640-9,670,836 | - | C2H3g27650 | CX3g028723 | LOC_Os03g19340 | Os03g0306302 | - | Detail |
| C1H3g02755 | 3:9,673,057-9,684,839 | - | C2H3g07435 | CX3g027549 | LOC_Os03g19350 | Os03g0306400 | - | Detail |
| C1H3g18574 | 3:9,693,186-9,693,707 | + | C2H3g20582 | CX3g026074 | LOC_Os03g19370 | Os03g0239400 | - | Detail |
| C1H3g08148 | 3:9,697,027-9,697,413 | + | C2H3g07871 | CX3g027392 | LOC_Os03g19380 | Os03g0306800 | - | Detail |
| C1H3g23949 | 3:9,698,066-9,699,944 | - | C2H3g26352 | CX3g025960 | LOC_Os03g19390 | Os03g0306900 | - | Detail |
| C1H3g18672 | 3:9,700,354-9,702,247 | + | C2H3g08753 | CX3g025770 | LOC_Os03g19400 | Os03g0307000 | - | Detail |
| C1H3g26919 | 3:9,704,213-9,712,441 | + | C2H3g28158 | CX3g025641 | LOC_Os03g19410 | Os03g0307100 | - | Detail |
| C1H3g07326 | 3:9,713,219-9,714,250 | + | C2H3g27859 | CX3g028955 | LOC_Os03g19427 | Os03g0307300 | - | Detail |
| C1H3g08713 | 3:9,718,529-9,721,420 | - | C2H3g23633 | CX3g027893 | LOC_Os03g19420 | Os03g0307200 | NAS2, OsNAS2 | Detail |
| C1H3g12875 | 3:9,726,075-9,726,569 | + | C2H3g12347 | CX3g027748 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C1H3g10945 | 3:9,728,815-9,730,023 | + | C2H3g00214 | CX3g025182 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C1H3g01117 | 3:9,730,438-9,733,711 | + | C2H3g27228 | CX3g028724 | LOC_Os03g19462 | - | - | Detail |
| C1H3g07984 | 3:9,736,446-9,738,788 | + | C2H3g27622 | CX3g026010 | LOC_Os03g19470 | Os03g0307700 | - | Detail |
| C1H3g00240 | 3:9,739,183-9,746,390 | - | C2H3g03655 | CX3g031316 | LOC_Os03g19480 | Os03g0307800 | IEZ1, OsiEZ1, OsSET1, SET1, iEZ1, OsEZ1/OsiEZ1, OsEZ1, EZ1, ez1, OsSET15, SDG718 | Detail |
| C1H3g04726 | 3:9,747,960-9,748,489 | + | C2H3g06844 | CX3g025615 | LOC_Os03g13830 | Os03g0307900 | - | Detail |
| C1H3g19730 | 3:9,749,541-9,752,191 | + | C2H3g23976 | CX3g024948 | LOC_Os03g19500 | Os03g0308000 | SMG3 | Detail |
| C1H3g14154 | 3:9,753,787-9,756,227 | - | C2H3g08220 | CX3g029346 | LOC_Os03g19510 | Os03g0308100 | - | Detail |
| C1H3g03825 | 3:9,757,509-9,765,821 | - | C2H3g05621 | CX3g025603 | LOC_Os03g19520 | Os03g0308200 | - | Detail |
| C1H3g14624 | 3:9,768,562-9,772,665 | + | C2H3g16168 | CX3g029899 | LOC_Os03g19530 | Os03g0308500 | - | Detail |
| C1H3g25260 | 3:9,776,622-9,777,400 | + | C2H3g22628 | CX3g025445 | LOC_Os03g19540 | Os03g0308600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036322 | 4:18,954,812-18,955,242 | - | C1H4g12484 | C2H4g10027 | LOC_Os02g35315 | Os04g0443801 | - | Detail |
| CX4g032651 | 4:18,957,163-18,959,030 | - | C1H4g12445 | C2H4g18187 | LOC_Os04g43560 | Os04g0536500 | - | Detail |
| CX4g035373 | 4:18,968,944-18,973,082 | - | C1H4g10795 | C2H4g06964 | LOC_Os04g46620 | Os04g0443900 | - | Detail |
| CX4g034155 | 4:18,973,559-18,974,281 | - | - | - | - | Os04g0443951 | - | Detail |
| CX4g031406 | 4:18,990,022-18,990,768 | - | - | - | - | Os04g0444050 | - | Detail |
| CX4g031398 | 4:18,995,521-19,000,448 | + | C1H4g01511 | C2H4g00367 | LOC_Os04g36660 | Os04g0444200 | - | Detail |
| CX4g032129 | 4:19,015,363-19,015,881 | + | - | C2H4g16468 | LOC_Os04g36670 | Os04g0444300 | OsARGOS | Detail |
| CX4g032495 | 4:19,017,319-19,021,799 | - | C1H4g01464 | C2H4g21834 | LOC_Os04g36680 | Os04g0444400 | - | Detail |
| CX4g035262 | 4:19,024,872-19,027,251 | + | C1H4g10961 | C2H4g14271 | LOC_Os04g36700 | Os04g0444600 | - | Detail |
| CX4g032233 | 4:19,041,392-19,047,093 | + | C1H4g02574 | C2H4g22232 | LOC_Os04g36720 | Os04g0444800 | - | Detail |
| CX4g035751 | 4:19,055,146-19,059,052 | + | C1H4g19141 | C2H4g01316 | LOC_Os04g36720 | Os04g0444800 | - | Detail |
| CX4g033534 | 4:19,060,839-19,063,138 | + | C1H4g01276 | C2H4g08818 | LOC_Os04g36730 | Os04g0444900 | - | Detail |
| CX4g035720 | 4:19,063,730-19,066,151 | - | C1H4g22503 | C2H4g11016 | LOC_Os04g36740 | Os04g0445000 | OsSKOR | Detail |
| CX4g033595 | 4:19,068,628-19,069,916 | - | C1H4g28185 | C2H4g13134 | LOC_Os04g36740 | - | - | Detail |
| CX4g032940 | 4:19,073,112-19,073,510 | - | - | - | - | - | - | Detail |
| CX4g034541 | 4:19,075,809-19,076,240 | + | - | C2H4g30174 | LOC_Os04g36750 | Os04g0445100 | - | Detail |
| CX4g034748 | 4:19,076,639-19,077,061 | - | - | C2H4g07739 | - | Os04g0478000 | - | Detail |
| CX4g031649 | 4:19,079,488-19,080,030 | - | C1H4g21010 | C2H4g28013 | LOC_Os04g36760 | Os04g0445200 | - | Detail |
| CX4g032135 | 4:19,081,230-19,081,799 | + | - | C2H4g27220 | LOC_Os04g36770 | Os04g0445300 | OsPMEI18 | Detail |
| CX4g036200 | 4:19,082,975-19,084,132 | + | C1H4g28209 | C2H4g12496 | LOC_Os04g36780 | Os04g0445400 | - | Detail |