| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13527 | 1:35,592,228-35,593,819 | - | C1H1g17623 | CX1g000619 | LOC_Os01g69240 | Os01g0921500 | - | Detail |
| C2H1g04376 | 1:35,594,292-35,597,650 | + | C1H1g22149 | CX1g000315 | LOC_Os01g69250 | Os01g0921600 | - | Detail |
| C2H1g29960 | 1:35,610,814-35,612,304 | - | C1H1g03696 | CX1g005205 | LOC_Os01g69270 | Os01g0921800 | WCR1 | Detail |
| C2H1g09433 | 1:35,666,759-35,671,474 | + | C1H1g03830 | CX1g004693 | LOC_Os01g69830 | Os01g0922600 | OsSPL2 | Detail |
| C2H1g26166 | 1:35,687,859-35,688,056 | + | C1H1g12266 | CX1g007029 | LOC_Os01g69850 | Os01g0922800 | MADS51, OsMADS51, OsMADS65, MADS65 | Detail |
| C2H1g12395 | 1:35,705,899-35,708,743 | + | C1H1g07999 | - | LOC_Os01g69850 | Os01g0922800 | MADS51, OsMADS51, OsMADS65, MADS65 | Detail |
| C2H1g01640 | 1:35,721,360-35,725,310 | + | C1H1g11016 | CX1g004462 | LOC_Os01g69900 | Os01g0923300 | - | Detail |
| C2H1g04390 | 1:35,728,528-35,734,512 | + | C1H1g13300 | CX1g004735 | LOC_Os01g69910 | Os01g0923600 | - | Detail |
| C2H1g25723 | 1:35,735,075-35,740,903 | - | C1H1g01597 | CX1g001516 | LOC_Os01g69920 | Os01g0923700 | HK3, OHK2, HK, OsHK3, Ohk, Crl2, Ohk2, OsHK3b | Detail |
| C2H1g05728 | 1:35,776,915-35,779,849 | - | C1H1g02952 | CX1g005730 | LOC_Os01g69940 | Os01g0923900 | - | Detail |
| C2H1g01923 | 1:35,787,046-35,788,517 | + | C1H1g29264 | CX1g005835 | LOC_Os01g69950 | Os01g0924000 | - | Detail |
| C2H1g07961 | 1:35,796,289-35,800,606 | - | C1H1g10772 | CX1g006541 | LOC_Os01g69970 | Os01g0924300 | - | Detail |
| C2H1g18855 | 1:35,816,815-35,823,491 | - | C1H1g29827 | CX1g005525 | LOC_Os01g69990 | Os01g0924600 | MHZ9 | Detail |
| C2H1g25318 | 1:35,829,628-35,831,721 | - | C1H1g07165 | CX1g000477 | LOC_Os01g70010 | Os01g0924800 | - | Detail |
| C2H1g12545 | 1:35,834,800-35,840,852 | + | C1H1g27548 | CX1g006526 | LOC_Os01g70020 | Os01g0924900 | - | Detail |
| C2H1g09893 | 1:35,842,124-35,844,153 | + | C1H1g13467 | CX1g005950 | LOC_Os01g63480 | Os01g0924933 | DPW2 | Detail |
| C2H1g29042 | 1:35,861,209-35,867,478 | - | C1H1g14986 | CX1g000475 | LOC_Os01g70060 | Os01g0925000 | - | Detail |
| C2H1g12590 | 1:35,873,631-35,874,811 | - | C1H1g14986 | CX1g000475 | LOC_Os01g70060 | Os01g0925000 | - | Detail |
| C2H1g27652 | 1:35,877,572-35,882,385 | - | C1H1g20180 | CX1g005348 | LOC_Os01g70080 | Os01g0925100 | - | Detail |
| C2H1g21256 | 1:35,884,785-35,887,277 | + | C1H1g19559 | CX1g006900 | LOC_Os01g70090 | Os01g0925200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036376 | 4:18,416,288-18,416,458 | + | - | - | - | - | - | Detail |
| CX4g033597 | 4:18,425,443-18,436,133 | - | C1H4g18837 | C2H4g12666 | LOC_Os04g35510 | Os04g0434600 | - | Detail |
| CX4g035656 | 4:18,439,217-18,443,043 | - | C1H4g16208 | C2H4g00913 | LOC_Os04g35520 | Os04g0434800 | OsAPX7, sAPX | Detail |
| CX4g035680 | 4:18,446,477-18,447,832 | + | C1H4g09329 | C2H4g20243 | LOC_Os04g35530 | Os04g0434900 | - | Detail |
| CX4g036436 | 4:18,455,921-18,460,080 | + | C1H4g19761 | C2H4g06857 | LOC_Os04g35540 | Os04g0435100 | - | Detail |
| CX4g034999 | 4:18,473,284-18,473,585 | + | C1H4g07963 | - | - | - | - | Detail |
| CX4g032696 | 4:18,480,990-18,481,895 | - | C1H4g18209 | C2H4g24818 | LOC_Os04g35560 | Os04g0435500 | - | Detail |
| CX4g035624 | 4:18,496,932-18,501,569 | + | C1H4g19177 | C2H4g14359 | LOC_Os04g35570 | Os04g0435700 | - | Detail |
| CX4g035076 | 4:18,506,975-18,507,841 | + | - | C2H4g25698 | LOC_Os04g35580 | Os04g0436000 | - | Detail |
| CX4g033235 | 4:18,510,188-18,513,119 | - | C1H4g12800 | C2H4g11818 | LOC_Os04g35590 | Os04g0436100 | OsACOT | Detail |
| CX4g035055 | 4:18,514,995-18,517,635 | - | C1H4g13941 | C2H4g10059 | LOC_Os04g35600 | Os04g0436300 | - | Detail |
| CX4g033241 | 4:18,520,609-18,520,782 | + | - | - | - | - | - | Detail |
| CX4g034176 | 4:18,526,157-18,527,163 | + | C1H4g19500 | C2H4g09494 | - | - | - | Detail |
| CX4g032362 | 4:18,529,359-18,531,521 | - | C1H4g20793 | C2H4g28461 | LOC_Os04g35650 | Os04g0436800 | - | Detail |
| CX4g035413 | 4:18,535,223-18,535,501 | - | - | - | - | Os04g0436900 | - | Detail |
| CX4g036547 | 4:18,537,386-18,538,461 | + | C1H4g00410 | C2H4g06819 | LOC_Os04g35660 | Os04g0437000 | - | Detail |
| CX4g034170 | 4:18,542,367-18,543,374 | + | - | - | LOC_Os04g35670 | - | - | Detail |
| CX4g031828 | 4:18,550,790-18,551,521 | + | - | C2H4g24561 | LOC_Os04g35680 | Os04g0437300 | - | Detail |
| CX4g032014 | 4:18,554,885-18,556,051 | + | - | C2H4g08680 | LOC_Os04g35690 | Os04g0437500 | - | Detail |
| CX4g034057 | 4:18,556,970-18,562,420 | - | C1H4g05515 | C2H4g05233 | LOC_Os04g35700 | Os04g0437600 | - | Detail |