| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g16031 | 12:4,495,209-4,495,847 | - | C1H12g00057 | CX12g018011 | - | - | - | Detail |
| C2H12g13338 | 12:4,504,009-4,509,180 | - | C1H12g21936 | CX12g015241 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g07984 | 12:4,516,918-4,520,606 | + | C1H12g18620 | CX12g018163 | LOC_Os12g09710 | Os12g0198900 | - | Detail |
| C2H12g13398 | 12:4,522,686-4,525,643 | - | C1H12g20422 | CX12g016268 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g09085 | 12:4,531,956-4,542,029 | - | C1H12g03660 | CX12g016763 | LOC_Os12g10460 | Os12g0199100 | - | Detail |
| C2H12g25382 | 12:4,561,839-4,565,485 | + | C1H12g18718 | - | - | - | - | Detail |
| C2H12g21993 | 12:4,568,789-4,571,070 | + | C1H12g29942 | CX12g015724 | LOC_Os12g10170 | Os12g0199500 | - | Detail |
| C2H12g02513 | 12:4,596,026-4,598,793 | - | C1H12g23734 | CX12g017268 | LOC_Os11g14670 | - | - | Detail |
| C2H12g06069 | 12:4,610,752-4,611,165 | - | C1H12g26851 | - | - | - | - | Detail |
| C2H12g23156 | 12:4,724,987-4,726,528 | + | C1H12g08099 | CX12g015438 | LOC_Os12g10140 | Os12g0202700 | - | Detail |
| C2H12g10521 | 12:4,727,388-4,728,439 | + | C1H12g25986 | CX12g015438 | LOC_Os12g10170 | Os12g0240900 | NOMT, OsNOMT, COMTL3, OsCOMTL3 | Detail |
| C2H12g28534 | 12:4,729,007-4,735,179 | - | C1H12g24838 | CX12g018391 | LOC_Os12g10180 | Os12g0202900 | - | Detail |
| C2H12g14596 | 12:4,736,631-4,738,688 | + | C1H12g13815 | CX12g015359 | LOC_Os12g10184 | Os12g0202850 | PGL12 | Detail |
| C2H12g19800 | 12:4,739,696-4,743,084 | + | C1H12g15070 | CX12g015359 | LOC_Os12g10190 | Os12g0203000 | - | Detail |
| C2H12g26432 | 12:4,744,095-4,746,553 | - | C1H12g07643 | CX12g015476 | LOC_Os12g10200 | Os12g0203100 | - | Detail |
| C2H12g29948 | 12:4,750,872-4,752,957 | + | C1H12g30565 | CX12g018695 | LOC_Os12g10220 | Os12g0203200 | - | Detail |
| C2H12g27282 | 12:4,780,000-4,780,482 | + | C1H12g14694 | CX12g017473 | LOC_Os12g10260 | Os12g0204000 | - | Detail |
| C2H12g03169 | 12:4,781,447-4,786,377 | + | C1H12g14346 | CX12g017473 | LOC_Os12g10270 | Os12g0632401 | - | Detail |
| C2H12g06639 | 12:4,791,041-4,794,004 | + | C1H12g25521 | CX12g015937 | LOC_Os12g10280 | Os12g0204100 | - | Detail |
| C2H12g05093 | 12:4,816,407-4,818,311 | - | C1H12g12793 | CX12g017749 | LOC_Os12g10330 | Os12g0204600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034875 | 4:18,250,820-18,252,322 | - | C1H4g18122 | C2H4g29290 | LOC_Os04g35250 | Os04g0432100 | - | Detail |
| CX4g031473 | 4:18,255,597-18,271,400 | - | C1H4g10844 | C2H4g05666 | LOC_Os04g35260 | Os04g0432200 | - | Detail |
| CX4g031867 | 4:18,275,527-18,277,038 | + | C1H4g11061 | C2H4g04986 | LOC_Os04g35270 | Os04g0432300 | - | Detail |
| CX4g034933 | 4:18,279,058-18,283,071 | - | C1H4g30724 | C2H4g00867 | LOC_Os04g35280 | Os04g0432400 | - | Detail |
| CX4g032091 | 4:18,285,685-18,286,070 | + | - | C2H8g28836 | - | - | - | Detail |
| CX4g036618 | 4:18,290,725-18,290,898 | + | - | - | - | - | - | Detail |
| CX4g031465 | 4:18,292,679-18,295,182 | - | C1H4g14575 | C2H4g00031 | LOC_Os04g35290 | Os04g0432500 | - | Detail |
| CX4g034540 | 4:18,296,992-18,297,171 | - | C1H4g14575 | C2H4g22655 | LOC_Os04g35300 | Os04g0432600 | - | Detail |
| CX4g035650 | 4:18,299,208-18,301,196 | - | C1H4g23042 | C2H4g20356 | LOC_Os04g35305 | Os04g0432800 | - | Detail |
| CX4g036629 | 4:18,302,433-18,309,935 | - | C1H4g18091 | C2H4g07440 | LOC_Os04g35310 | Os04g0433000 | - | Detail |
| CX4g032398 | 4:18,338,484-18,347,524 | + | C1H4g18234 | C2H4g22168 | LOC_Os04g35380 | Os04g0433200 | - | Detail |
| CX4g032298 | 4:18,351,061-18,351,750 | + | C1H4g24371 | C2H4g19405 | LOC_Os04g35390 | Os04g0433300 | - | Detail |
| CX4g034124 | 4:18,361,079-18,361,357 | - | - | C2H4g16542 | - | - | - | Detail |
| CX4g033528 | 4:18,365,595-18,368,816 | - | C1H4g04051 | C2H4g19627 | LOC_Os04g35410 | Os04g0433600 | - | Detail |
| CX4g032013 | 4:18,374,707-18,384,385 | - | C1H4g09671 | C2H4g01376 | LOC_Os04g35420 | Os04g0433800 | OsRecQl4 | Detail |
| CX4g032480 | 4:18,386,510-18,392,991 | - | C1H4g26209 | C2H4g24266 | LOC_Os04g35430 | Os04g0433900 | - | Detail |
| CX4g036182 | 4:18,404,290-18,408,043 | - | C1H4g16755 | C2H4g14516 | LOC_Os04g35480 | Os04g0434300 | - | Detail |
| CX4g033477 | 4:18,408,195-18,409,873 | + | C1H4g01137 | C2H4g03670 | LOC_Os04g35490 | Os04g0434400 | - | Detail |
| CX4g033142 | 4:18,413,953-18,414,819 | - | - | C2H4g25515 | LOC_Os04g35500 | Os04g0434500 | - | Detail |
| CX4g035954 | 4:18,415,658-18,415,837 | - | - | - | - | - | - | Detail |