| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01936 | 3:18,769,849-18,770,589 | - | C1H3g06313 | CX3g026822 | LOC_Os03g36650 | Os03g0564600 | - | Detail |
| C2H3g24254 | 3:18,798,461-18,799,456 | - | C1H3g28639 | CX3g030746 | LOC_Os03g36730 | Os03g0565100 | - | Detail |
| C2H3g16341 | 3:18,812,999-18,820,150 | + | C1H3g02915 | CX3g030180 | LOC_Os03g36750 | Os03g0565200 | - | Detail |
| C2H3g09325 | 3:18,822,889-18,827,425 | + | C1H3g22618 | CX3g025334 | LOC_Os03g36760 | Os03g0565300 | - | Detail |
| C2H3g16767 | 3:18,836,422-18,851,133 | + | C1H3g29496 | CX3g030739 | LOC_Os03g36780 | Os03g0565500 | - | Detail |
| C2H3g12114 | 3:18,854,343-18,859,940 | - | C1H3g13363 | CX3g029595 | LOC_Os03g36790 | Os03g0565600 | - | Detail |
| C2H3g20304 | 3:18,869,325-18,872,133 | - | C1H3g22145 | CX3g027738 | LOC_Os03g36830 | Os03g0565900 | - | Detail |
| C2H3g02382 | 3:18,901,233-18,905,222 | - | C1H3g03992 | CX3g027468 | LOC_Os03g36900 | Os03g0566500 | - | Detail |
| C2H3g13499 | 3:18,909,738-18,912,065 | + | C1H3g30925 | CX3g026657 | LOC_Os03g36910 | Os03g0566600 | - | Detail |
| C2H3g26454 | 3:18,912,799-18,916,071 | - | C1H3g18058 | CX3g025200 | LOC_Os03g36920 | Os03g0566700 | - | Detail |
| C2H3g29578 | 3:18,917,243-18,921,727 | - | C1H3g23101 | CX3g027874 | LOC_Os03g36930 | Os03g0566800 | OsRH34 | Detail |
| C2H3g07333 | 3:18,939,378-18,943,165 | - | C1H3g16061 | CX3g026662 | LOC_Os03g37010 | Os03g0567600 | - | Detail |
| C2H3g10852 | 3:18,958,051-18,961,075 | + | C1H3g23205 | CX3g029436 | LOC_Os03g37070 | Os03g0850200 | - | Detail |
| C2H3g20404 | 3:18,965,339-18,967,301 | + | C1H3g08263 | CX3g025716 | LOC_Os03g37080 | Os03g0568400 | - | Detail |
| C2H3g17716 | 3:18,967,920-18,970,629 | - | C1H3g01309 | CX3g029847 | LOC_Os03g37090 | Os03g0568500 | - | Detail |
| C2H3g18006 | 3:18,973,715-18,975,205 | + | C1H3g18739 | CX3g026252 | LOC_Os03g37100 | Os03g0568600 | - | Detail |
| C2H3g16322 | 3:18,980,226-18,982,859 | + | C1H3g05688 | CX3g027192 | LOC_Os03g37120 | Os03g0568800 | - | Detail |
| C2H3g06254 | 3:18,983,206-18,988,369 | - | C1H3g03504 | CX3g029489 | LOC_Os03g37130 | Os03g0568900 | - | Detail |
| C2H3g17441 | 3:18,997,158-19,001,482 | - | C1H3g26605 | CX3g025311 | LOC_Os03g37140 | Os03g0569000 | - | Detail |
| C2H3g20952 | 3:19,017,161-19,018,262 | - | C1H3g17254 | CX3g030124 | LOC_Os03g37250 | Os03g0371800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005284 | 1:19,840,354-19,841,424 | + | C1H1g31047 | C2H1g30674 | LOC_Os01g39350 | Os01g0575400 | - | Detail |
| CX1g002175 | 1:19,845,998-19,863,003 | - | C1H1g31451 | C2H1g09392 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| CX1g005111 | 1:19,870,249-19,873,857 | - | C1H6g07558 | C2H2g00568 | LOC_Os01g46100 | - | - | Detail |
| CX1g004032 | 1:19,900,276-19,900,650 | + | - | - | - | - | - | Detail |
| CX1g002537 | 1:19,901,526-19,901,879 | + | - | - | - | - | - | Detail |
| CX1g007101 | 1:19,907,093-19,907,577 | - | - | C2H8g28836 | - | - | - | Detail |
| CX1g001079 | 1:19,919,363-19,919,898 | + | C1H1g22058 | C2H1g23511 | LOC_Os01g39480 | Os01g0576100 | Rb1 | Detail |
| CX1g002168 | 1:19,984,781-19,984,957 | + | - | - | - | - | - | Detail |
| CX1g004267 | 1:19,996,399-20,003,092 | + | C1H1g30169 | C2H1g23392 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| CX1g005578 | 1:20,016,527-20,019,840 | - | C1H1g25385 | C2H1g00498 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| CX1g000218 | 1:20,022,966-20,023,589 | - | - | - | - | - | - | Detail |
| CX1g004896 | 1:20,029,435-20,029,587 | + | - | - | - | - | - | Detail |
| CX1g005347 | 1:20,033,599-20,038,732 | - | C1H1g03498 | C2H1g04424 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| CX1g003861 | 1:20,045,937-20,049,831 | - | C1H1g20612 | C2H1g11258 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| CX1g000177 | 1:20,059,911-20,060,959 | + | C1H1g26503 | C2H1g04472 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| CX1g001044 | 1:20,068,971-20,070,290 | + | - | - | LOC_Os01g39690 | Os01g0578800 | - | Detail |
| CX1g006142 | 1:20,072,391-20,072,678 | + | - | - | - | Os11g0596250 | - | Detail |
| CX1g002194 | 1:20,076,154-20,076,348 | + | - | - | - | - | - | Detail |
| CX1g001536 | 1:20,077,678-20,077,890 | - | - | - | - | - | - | Detail |
| CX1g006804 | 1:20,087,481-20,087,768 | - | - | - | LOC_Os01g39710 | Os01g0579000 | - | Detail |