| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g27199 | 12:22,975,223-22,976,503 | - | C1H12g29884 | CX12g017391 | LOC_Os12g44080 | Os12g0637900 | - | Detail |
| C2H12g11486 | 12:22,979,251-22,983,135 | - | C1H12g01167 | CX12g016299 | LOC_Os12g44090 | Os12g0638100 | - | Detail |
| C2H12g17983 | 12:22,985,118-22,990,464 | - | C1H12g29501 | CX12g018788 | LOC_Os12g44100 | Os12g0638200 | OsNPF2.2 | Detail |
| C2H12g19813 | 12:23,008,767-23,010,500 | - | C1H12g04509 | CX12g017673 | LOC_Os12g44110 | Os12g0638300 | - | Detail |
| C2H12g20085 | 12:23,019,253-23,021,733 | + | C1H12g15698 | CX12g017445 | LOC_Os12g44130 | Os12g0638400 | - | Detail |
| C2H12g27409 | 12:23,023,265-23,026,881 | + | C1H12g01101 | CX12g018736 | LOC_Os12g44140 | Os12g0638600 | - | Detail |
| C2H12g30262 | 12:23,030,896-23,037,701 | + | C1H12g01740 | CX12g015362 | LOC_Os12g44150 | Os12g0638700 | - | Detail |
| C2H12g05046 | 12:23,038,367-23,042,359 | + | C1H12g24197 | CX12g017047 | LOC_Os12g44160 | Os12g0638800 | - | Detail |
| C2H12g20406 | 12:23,042,543-23,047,335 | - | C1H12g26047 | CX12g017480 | LOC_Os12g44170 | Os12g0638900 | - | Detail |
| C2H12g20478 | 12:23,051,486-23,054,884 | + | C1H12g17835 | CX12g018521 | LOC_Os12g44180 | Os12g0639100 | - | Detail |
| C2H12g03407 | 12:23,057,358-23,058,932 | - | C1H12g02746 | CX12g016287 | LOC_Os12g44190 | Os12g0639200 | - | Detail |
| C2H12g24727 | 12:23,061,495-23,063,443 | + | C1H12g02702 | CX12g018574 | LOC_Os12g44220 | Os12g0639400 | - | Detail |
| C2H12g10541 | 12:23,064,505-23,065,272 | + | C1H12g02702 | CX12g016375 | LOC_Os12g44210 | Os12g0639400 | - | Detail |
| C2H12g14339 | 12:23,067,850-23,069,394 | + | C1H12g25899 | CX12g018574 | LOC_Os12g44220 | Os12g0639500 | - | Detail |
| C2H12g13699 | 12:23,074,434-23,079,552 | + | C1H12g11343 | CX12g016975 | LOC_Os12g44230 | Os12g0639600 | - | Detail |
| C2H12g23325 | 12:23,080,566-23,083,065 | + | C1H12g28623 | CX12g015243 | LOC_Os12g44240 | Os12g0639700 | - | Detail |
| C2H12g04626 | 12:23,083,741-23,085,273 | + | C1H12g14677 | CX12g017847 | LOC_Os12g44250 | Os12g0639800 | - | Detail |
| C2H12g23922 | 12:23,085,502-23,086,107 | - | C1H12g03928 | CX2g019148 | LOC_Os12g44260 | - | - | Detail |
| C2H12g15193 | 12:23,092,899-23,094,104 | - | C1H12g20785 | CX12g016277 | - | - | - | Detail |
| C2H12g27644 | 12:23,097,597-23,098,202 | - | C1H12g03928 | CX2g019148 | LOC_Os12g44260 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005284 | 1:19,840,354-19,841,424 | + | C1H1g31047 | C2H1g30674 | LOC_Os01g39350 | Os01g0575400 | - | Detail |
| CX1g002175 | 1:19,845,998-19,863,003 | - | C1H1g31451 | C2H1g09392 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| CX1g005111 | 1:19,870,249-19,873,857 | - | C1H6g07558 | C2H2g00568 | LOC_Os01g46100 | - | - | Detail |
| CX1g004032 | 1:19,900,276-19,900,650 | + | - | - | - | - | - | Detail |
| CX1g002537 | 1:19,901,526-19,901,879 | + | - | - | - | - | - | Detail |
| CX1g007101 | 1:19,907,093-19,907,577 | - | - | C2H8g28836 | - | - | - | Detail |
| CX1g001079 | 1:19,919,363-19,919,898 | + | C1H1g22058 | C2H1g23511 | LOC_Os01g39480 | Os01g0576100 | Rb1 | Detail |
| CX1g002168 | 1:19,984,781-19,984,957 | + | - | - | - | - | - | Detail |
| CX1g004267 | 1:19,996,399-20,003,092 | + | C1H1g30169 | C2H1g23392 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| CX1g005578 | 1:20,016,527-20,019,840 | - | C1H1g25385 | C2H1g00498 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| CX1g000218 | 1:20,022,966-20,023,589 | - | - | - | - | - | - | Detail |
| CX1g004896 | 1:20,029,435-20,029,587 | + | - | - | - | - | - | Detail |
| CX1g005347 | 1:20,033,599-20,038,732 | - | C1H1g03498 | C2H1g04424 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| CX1g003861 | 1:20,045,937-20,049,831 | - | C1H1g20612 | C2H1g11258 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| CX1g000177 | 1:20,059,911-20,060,959 | + | C1H1g26503 | C2H1g04472 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| CX1g001044 | 1:20,068,971-20,070,290 | + | - | - | LOC_Os01g39690 | Os01g0578800 | - | Detail |
| CX1g006142 | 1:20,072,391-20,072,678 | + | - | - | - | Os11g0596250 | - | Detail |
| CX1g002194 | 1:20,076,154-20,076,348 | + | - | - | - | - | - | Detail |
| CX1g001536 | 1:20,077,678-20,077,890 | - | - | - | - | - | - | Detail |
| CX1g006804 | 1:20,087,481-20,087,768 | - | - | - | LOC_Os01g39710 | Os01g0579000 | - | Detail |