| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20281 | 1:34,610,695-34,612,889 | + | C2H1g30021 | CX1g001366 | - | Os01g0898800 | - | Detail |
| C1H1g13611 | 1:34,616,176-34,621,046 | + | C2H1g25365 | CX1g002818 | LOC_Os01g67330 | Os01g0898900 | - | Detail |
| C1H1g22738 | 1:34,623,125-34,625,277 | - | C2H1g14239 | CX1g005754 | LOC_Os01g67340 | Os01g0899000 | - | Detail |
| C1H1g24100 | 1:34,633,154-34,634,374 | + | C2H1g03375 | CX1g000738 | LOC_Os01g67350 | Os01g0899100 | - | Detail |
| C1H1g16761 | 1:34,635,061-34,638,063 | - | C2H1g12354 | CX1g003678 | LOC_Os01g67360 | Os01g0899200 | - | Detail |
| C1H1g13163 | 1:34,642,855-34,647,955 | - | C2H1g12009 | CX1g003648 | LOC_Os01g67370 | Os01g0899500 | - | Detail |
| C1H1g18275 | 1:34,650,779-34,652,474 | - | C2H1g06986 | CX1g003014 | LOC_Os01g67390 | Os01g0899700 | COG2 | Detail |
| C1H1g21259 | 1:34,654,698-34,658,314 | - | C2H1g13678 | CX1g005480 | LOC_Os01g67410 | Os01g0899800 | - | Detail |
| C1H1g15270 | 1:34,668,538-34,675,241 | + | C2H1g15739 | CX1g001856 | LOC_Os01g67420 | Os01g0900200 | - | Detail |
| C1H1g31442 | 1:34,687,248-34,688,606 | + | C2H1g20530 | CX1g005565 | LOC_Os01g67430 | Os01g0900400 | EG1, eg1 | Detail |
| C1H1g09474 | 1:34,699,258-34,700,595 | + | C2H1g20530 | CX1g005830 | LOC_Os01g67450 | Os01g0900700 | - | Detail |
| C1H1g14363 | 1:34,715,361-34,720,653 | + | C2H1g07733 | CX1g005857 | LOC_Os01g67480 | Os01g0900800 | - | Detail |
| C1H1g14549 | 1:34,720,957-34,722,715 | - | C2H1g29765 | CX1g000615 | LOC_Os01g67490 | Os01g0900900 | - | Detail |
| C1H1g27174 | 1:34,725,689-34,729,954 | - | C2H1g26804 | CX1g005989 | LOC_Os01g67500 | Os01g0901000 | - | Detail |
| C1H1g12588 | 1:34,741,637-34,746,917 | - | C2H1g11554 | CX1g004183 | LOC_Os01g67510 | Os01g0901200 | - | Detail |
| C1H1g21800 | 1:34,747,607-34,750,075 | + | C2H1g14361 | - | LOC_Os01g67520 | Os01g0901300 | - | Detail |
| C1H1g13500 | 1:34,755,872-34,759,639 | + | C2H1g28157 | CX1g001539 | LOC_Os01g67530 | Os01g0901500 | - | Detail |
| C1H1g09998 | 1:34,761,164-34,764,368 | + | C2H1g10318 | CX1g001539 | LOC_Os01g67540 | Os01g0901600 | - | Detail |
| C1H1g11167 | 1:34,765,250-34,769,081 | + | C2H1g14160 | CX1g003814 | LOC_Os01g67550 | Os01g0901700 | - | Detail |
| C1H1g11537 | 1:34,769,504-34,771,712 | - | C2H1g10209 | CX1g002950 | LOC_Os01g67560 | Os01g0901800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005284 | 1:19,840,354-19,841,424 | + | C1H1g31047 | C2H1g30674 | LOC_Os01g39350 | Os01g0575400 | - | Detail |
| CX1g002175 | 1:19,845,998-19,863,003 | - | C1H1g31451 | C2H1g09392 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| CX1g005111 | 1:19,870,249-19,873,857 | - | C1H6g07558 | C2H2g00568 | LOC_Os01g46100 | - | - | Detail |
| CX1g004032 | 1:19,900,276-19,900,650 | + | - | - | - | - | - | Detail |
| CX1g002537 | 1:19,901,526-19,901,879 | + | - | - | - | - | - | Detail |
| CX1g007101 | 1:19,907,093-19,907,577 | - | - | C2H8g28836 | - | - | - | Detail |
| CX1g001079 | 1:19,919,363-19,919,898 | + | C1H1g22058 | C2H1g23511 | LOC_Os01g39480 | Os01g0576100 | Rb1 | Detail |
| CX1g002168 | 1:19,984,781-19,984,957 | + | - | - | - | - | - | Detail |
| CX1g004267 | 1:19,996,399-20,003,092 | + | C1H1g30169 | C2H1g23392 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| CX1g005578 | 1:20,016,527-20,019,840 | - | C1H1g25385 | C2H1g00498 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| CX1g000218 | 1:20,022,966-20,023,589 | - | - | - | - | - | - | Detail |
| CX1g004896 | 1:20,029,435-20,029,587 | + | - | - | - | - | - | Detail |
| CX1g005347 | 1:20,033,599-20,038,732 | - | C1H1g03498 | C2H1g04424 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| CX1g003861 | 1:20,045,937-20,049,831 | - | C1H1g20612 | C2H1g11258 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| CX1g000177 | 1:20,059,911-20,060,959 | + | C1H1g26503 | C2H1g04472 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| CX1g001044 | 1:20,068,971-20,070,290 | + | - | - | LOC_Os01g39690 | Os01g0578800 | - | Detail |
| CX1g006142 | 1:20,072,391-20,072,678 | + | - | - | - | Os11g0596250 | - | Detail |
| CX1g002194 | 1:20,076,154-20,076,348 | + | - | - | - | - | - | Detail |
| CX1g001536 | 1:20,077,678-20,077,890 | - | - | - | - | - | - | Detail |
| CX1g006804 | 1:20,087,481-20,087,768 | - | - | - | LOC_Os01g39710 | Os01g0579000 | - | Detail |