| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g24592 | 7:24,800,589-24,804,139 | - | C2H7g27364 | CX7g050407 | LOC_Os07g48570 | Os07g0685000 | OsCDF3, RDD2 | Detail |
| C1H7g20266 | 7:24,808,526-24,810,709 | - | C2H7g00607 | CX7g046130 | LOC_Os07g48596 | Os07g0685300 | - | Detail |
| C1H7g00115 | 7:24,813,288-24,826,061 | - | C2H7g22371 | CX7g048563 | LOC_Os07g48602 | Os07g0685400 | - | Detail |
| C1H7g07276 | 7:24,826,565-24,828,155 | + | C2H7g15109 | CX7g049406 | LOC_Os07g48610 | Os07g0685500 | - | Detail |
| C1H7g02497 | 7:24,839,865-24,842,541 | - | - | - | - | - | - | Detail |
| C1H7g05652 | 7:24,847,238-24,850,276 | + | C2H7g06259 | CX7g049228 | LOC_Os07g48640 | Os07g0685800 | - | Detail |
| C1H7g30031 | 7:24,850,792-24,851,492 | + | C2H7g03520 | CX7g047810 | - | - | - | Detail |
| C1H7g29619 | 7:24,853,614-24,855,950 | + | C2H7g03520 | CX7g047810 | LOC_Os07g48650 | Os07g0685900 | - | Detail |
| C1H7g31573 | 7:24,868,326-24,869,881 | + | C2H7g23755 | CX7g048415 | LOC_Os07g48660 | Os07g0686100 | OsbZIP62 | Detail |
| C1H7g28364 | 7:24,875,270-24,875,818 | - | C2H7g19090 | CX7g049506 | LOC_Os07g48680 | Os07g0686300 | - | Detail |
| C1H7g03420 | 7:24,878,097-24,885,972 | + | C2H7g01781 | - | - | - | - | Detail |
| C1H7g30458 | 7:24,881,927-24,886,215 | - | C2H7g27862 | CX7g046233 | LOC_Os07g48700 | Os07g0686400 | - | Detail |
| C1H7g19015 | 7:24,887,135-24,891,023 | + | C2H7g19437 | CX7g048143 | LOC_Os07g48690 | Os07g0686500 | - | Detail |
| C1H7g12412 | 7:24,894,785-24,895,552 | + | C2H3g13875 | CX7g046198 | LOC_Os07g48710 | Os07g0686600 | - | Detail |
| C1H7g15383 | 7:24,897,177-24,901,549 | + | C2H7g01734 | CX7g049468 | LOC_Os07g48720 | Os07g0686700 | - | Detail |
| C1H7g31507 | 7:24,902,780-24,904,384 | + | C2H7g18189 | CX7g048911 | LOC_Os07g48730 | Os07g0686800 | OsRLCK241 | Detail |
| C1H7g07622 | 7:24,906,780-24,911,724 | + | C2H7g24604 | CX7g050155 | LOC_Os07g48750 | Os07g0686900 | - | Detail |
| C1H7g15393 | 7:24,914,090-24,917,017 | + | C2H7g10362 | CX7g046159 | LOC_Os07g48760 | Os07g0687000 | CIPK03, OsCIPK03, CIPK3, OsCIPK3 | Detail |
| C1H7g28188 | 7:24,917,977-24,923,116 | - | C2H7g02535 | CX7g047608 | LOC_Os07g48780 | Os07g0687100 | - | Detail |
| C1H7g20383 | 7:24,925,157-24,927,650 | - | C2H7g06868 | CX7g047899 | LOC_Os07g48790 | Os07g0687300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005284 | 1:19,840,354-19,841,424 | + | C1H1g31047 | C2H1g30674 | LOC_Os01g39350 | Os01g0575400 | - | Detail |
| CX1g002175 | 1:19,845,998-19,863,003 | - | C1H1g31451 | C2H1g09392 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| CX1g005111 | 1:19,870,249-19,873,857 | - | C1H6g07558 | C2H2g00568 | LOC_Os01g46100 | - | - | Detail |
| CX1g004032 | 1:19,900,276-19,900,650 | + | - | - | - | - | - | Detail |
| CX1g002537 | 1:19,901,526-19,901,879 | + | - | - | - | - | - | Detail |
| CX1g007101 | 1:19,907,093-19,907,577 | - | - | C2H8g28836 | - | - | - | Detail |
| CX1g001079 | 1:19,919,363-19,919,898 | + | C1H1g22058 | C2H1g23511 | LOC_Os01g39480 | Os01g0576100 | Rb1 | Detail |
| CX1g002168 | 1:19,984,781-19,984,957 | + | - | - | - | - | - | Detail |
| CX1g004267 | 1:19,996,399-20,003,092 | + | C1H1g30169 | C2H1g23392 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| CX1g005578 | 1:20,016,527-20,019,840 | - | C1H1g25385 | C2H1g00498 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| CX1g000218 | 1:20,022,966-20,023,589 | - | - | - | - | - | - | Detail |
| CX1g004896 | 1:20,029,435-20,029,587 | + | - | - | - | - | - | Detail |
| CX1g005347 | 1:20,033,599-20,038,732 | - | C1H1g03498 | C2H1g04424 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| CX1g003861 | 1:20,045,937-20,049,831 | - | C1H1g20612 | C2H1g11258 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| CX1g000177 | 1:20,059,911-20,060,959 | + | C1H1g26503 | C2H1g04472 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| CX1g001044 | 1:20,068,971-20,070,290 | + | - | - | LOC_Os01g39690 | Os01g0578800 | - | Detail |
| CX1g006142 | 1:20,072,391-20,072,678 | + | - | - | - | Os11g0596250 | - | Detail |
| CX1g002194 | 1:20,076,154-20,076,348 | + | - | - | - | - | - | Detail |
| CX1g001536 | 1:20,077,678-20,077,890 | - | - | - | - | - | - | Detail |
| CX1g006804 | 1:20,087,481-20,087,768 | - | - | - | LOC_Os01g39710 | Os01g0579000 | - | Detail |