| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g30743 | 7:12,825,064-12,828,741 | - | C2H7g26716 | CX7g047444 | LOC_Os07g26560 | Os07g0447000 | - | Detail |
| C1H7g11360 | 7:12,831,973-12,833,804 | - | C2H7g28153 | - | - | - | - | Detail |
| C1H7g10421 | 7:12,860,457-12,874,392 | + | C2H7g16004 | CX7g046302 | LOC_Os07g26610 | Os07g0447800 | - | Detail |
| C1H7g19669 | 7:12,879,165-12,880,244 | + | C2H7g29828 | CX7g047860 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| C1H7g02013 | 7:12,894,070-12,895,112 | + | C2H7g04872 | CX7g048399 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| C1H7g13570 | 7:12,901,783-12,902,963 | + | C2H7g25955 | CX7g049385 | LOC_Os07g26660 | Os07g0448100 | OsPIP2;4 | Detail |
| C1H7g11593 | 7:12,939,597-12,944,456 | + | C2H7g26880 | CX7g049950 | LOC_Os07g26690 | Os07g0448800 | - | Detail |
| C1H7g07851 | 7:12,953,020-12,954,405 | - | C2H7g23663 | CX7g050322 | LOC_Os07g26700 | Os07g0449100 | - | Detail |
| C1H7g22458 | 7:12,978,857-12,980,325 | + | C2H7g19396 | CX7g049783 | LOC_Os07g26720 | Os07g0449700 | RR7, rr7, OsRR7, Rra5, OsRRA5 | Detail |
| C1H7g16744 | 7:12,980,935-12,981,264 | - | C2H7g02938 | - | - | - | - | Detail |
| C1H7g28009 | 7:12,981,623-12,983,687 | - | C2H7g02938 | CX7g046951 | LOC_Os07g26730 | Os07g0481400 | - | Detail |
| C1H7g28266 | 7:12,985,596-12,988,109 | + | C2H7g11079 | CX7g049510 | LOC_Os07g26740 | Os07g0450000 | - | Detail |
| C1H7g22365 | 7:13,086,965-13,088,515 | + | C2H7g10439 | CX7g047342 | LOC_Os07g26870 | Os07g0451300 | - | Detail |
| C1H7g00534 | 7:13,096,061-13,097,594 | + | C2H7g29545 | CX7g047774 | LOC_Os07g26870 | Os07g0451300 | - | Detail |
| C1H7g02317 | 7:13,102,563-13,104,785 | + | C2H7g21721 | CX7g047554 | LOC_Os07g26900 | Os07g0452100 | - | Detail |
| C1H7g04565 | 7:13,108,090-13,109,177 | + | C2H7g21721 | CX7g047554 | LOC_Os07g26900 | Os07g0452100 | - | Detail |
| C1H7g17151 | 7:13,114,385-13,120,817 | + | C2H7g10448 | CX7g046832 | LOC_Os07g26930 | Os07g0452400 | - | Detail |
| C1H7g09551 | 7:13,123,077-13,125,025 | - | C2H7g28483 | CX7g049661 | LOC_Os07g26940 | Os07g0452500 | - | Detail |
| C1H7g14083 | 7:13,132,131-13,134,508 | + | C2H7g00694 | CX7g047726 | LOC_Os07g26960 | Os07g0452600 | - | Detail |
| C1H7g17102 | 7:13,137,995-13,139,962 | - | C2H7g23804 | CX7g047550 | LOC_Os07g26974 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005284 | 1:19,840,354-19,841,424 | + | C1H1g31047 | C2H1g30674 | LOC_Os01g39350 | Os01g0575400 | - | Detail |
| CX1g002175 | 1:19,845,998-19,863,003 | - | C1H1g31451 | C2H1g09392 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| CX1g005111 | 1:19,870,249-19,873,857 | - | C1H6g07558 | C2H2g00568 | LOC_Os01g46100 | - | - | Detail |
| CX1g004032 | 1:19,900,276-19,900,650 | + | - | - | - | - | - | Detail |
| CX1g002537 | 1:19,901,526-19,901,879 | + | - | - | - | - | - | Detail |
| CX1g007101 | 1:19,907,093-19,907,577 | - | - | C2H8g28836 | - | - | - | Detail |
| CX1g001079 | 1:19,919,363-19,919,898 | + | C1H1g22058 | C2H1g23511 | LOC_Os01g39480 | Os01g0576100 | Rb1 | Detail |
| CX1g002168 | 1:19,984,781-19,984,957 | + | - | - | - | - | - | Detail |
| CX1g004267 | 1:19,996,399-20,003,092 | + | C1H1g30169 | C2H1g23392 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| CX1g005578 | 1:20,016,527-20,019,840 | - | C1H1g25385 | C2H1g00498 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| CX1g000218 | 1:20,022,966-20,023,589 | - | - | - | - | - | - | Detail |
| CX1g004896 | 1:20,029,435-20,029,587 | + | - | - | - | - | - | Detail |
| CX1g005347 | 1:20,033,599-20,038,732 | - | C1H1g03498 | C2H1g04424 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| CX1g003861 | 1:20,045,937-20,049,831 | - | C1H1g20612 | C2H1g11258 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| CX1g000177 | 1:20,059,911-20,060,959 | + | C1H1g26503 | C2H1g04472 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| CX1g001044 | 1:20,068,971-20,070,290 | + | - | - | LOC_Os01g39690 | Os01g0578800 | - | Detail |
| CX1g006142 | 1:20,072,391-20,072,678 | + | - | - | - | Os11g0596250 | - | Detail |
| CX1g002194 | 1:20,076,154-20,076,348 | + | - | - | - | - | - | Detail |
| CX1g001536 | 1:20,077,678-20,077,890 | - | - | - | - | - | - | Detail |
| CX1g006804 | 1:20,087,481-20,087,768 | - | - | - | LOC_Os01g39710 | Os01g0579000 | - | Detail |