| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g29478 | 9:16,389,509-16,395,873 | + | C2H9g06327 | CX9g057601 | LOC_Os09g33500 | Os09g0509200 | - | Detail |
| C1H9g15901 | 9:16,397,154-16,404,688 | + | C2H9g10101 | CX9g058204 | LOC_Os09g33510 | Os09g0509300 | WEG1 | Detail |
| C1H9g15862 | 9:16,408,832-16,413,897 | + | C2H9g04957 | CX9g055855 | LOC_Os09g33520 | Os09g0509400 | - | Detail |
| C1H9g17965 | 9:16,414,190-16,419,187 | - | C2H9g14518 | CX9g058193 | LOC_Os09g33530 | Os09g0509500 | - | Detail |
| C1H9g04511 | 9:16,421,318-16,424,168 | - | C2H9g12462 | CX9g056413 | LOC_Os09g33550 | Os09g0509700 | - | Detail |
| C1H9g11265 | 9:16,433,249-16,435,664 | + | - | CX9g058151 | LOC_Os09g33559 | Os09g0510000 | - | Detail |
| C1H9g11281 | 9:16,437,077-16,439,269 | + | C2H9g04068 | CX9g058151 | - | Os09g0510200 | - | Detail |
| C1H9g15137 | 9:16,451,997-16,453,533 | - | C2H9g26341 | CX9g056619 | LOC_Os09g33580 | Os09g0510500 | OsBC1, OsbHLH081, OsbHLH082 | Detail |
| C1H9g21051 | 9:16,458,985-16,466,718 | - | C2H9g18076 | CX9g057001 | LOC_Os09g33600 | Os09g0510700 | - | Detail |
| C1H9g03900 | 9:16,478,005-16,483,125 | - | C2H9g05808 | CX9g055215 | LOC_Os09g33620 | Os09g0510900 | - | Detail |
| C1H9g13447 | 9:16,485,958-16,492,026 | + | C2H9g14546 | CX9g057751 | LOC_Os09g33630 | Os09g0511000 | OsCERK2, OsRLK10, OsCERK2/OsRLK10 | Detail |
| C1H9g24699 | 9:16,493,882-16,494,604 | + | C2H9g06231 | CX9g056377 | LOC_Os09g33640 | Os09g0511200 | - | Detail |
| C1H9g26937 | 9:16,501,317-16,501,982 | + | C2H9g06231 | CX9g055485 | LOC_Os09g33650 | Os09g0511300 | - | Detail |
| C1H9g13732 | 9:16,505,827-16,509,486 | + | C2H9g26021 | CX9g055613 | LOC_Os09g33670 | Os09g0511500 | - | Detail |
| C1H9g03686 | 9:16,509,903-16,515,489 | - | C2H9g15804 | CX9g055005 | LOC_Os09g33680 | Os09g0511600 | - | Detail |
| C1H9g02461 | 9:16,518,528-16,523,572 | - | C2H9g00008 | CX9g057948 | LOC_Os09g33690 | Os09g0511700 | - | Detail |
| C1H9g16548 | 9:16,536,987-16,542,216 | - | C2H9g13098 | CX9g058029 | LOC_Os09g33710 | Os09g0511900 | Os9BGlu33 | Detail |
| C1H9g24289 | 9:16,544,410-16,546,557 | + | C2H9g16266 | CX9g057810 | LOC_Os09g33720 | Os09g0512000 | - | Detail |
| C1H9g03253 | 9:16,548,651-16,552,227 | + | C2H9g23608 | CX9g056420 | LOC_Os09g33780 | Os09g0512700 | OsFes1C | Detail |
| C1H9g01992 | 9:16,554,655-16,556,893 | + | C2H9g10289 | CX9g055941 | LOC_Os09g33790 | Os09g0512800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036148 | 4:18,087,951-18,093,309 | - | C1H4g20886 | C2H4g11608 | LOC_Os04g35030 | Os04g0429600 | OsCSLH3 | Detail |
| CX4g036060 | 4:18,094,849-18,095,079 | + | - | - | LOC_Os04g14390 | - | - | Detail |
| CX4g036491 | 4:18,101,035-18,101,241 | + | - | - | - | Os09g0341901 | - | Detail |
| CX4g035578 | 4:18,124,566-18,132,011 | + | C1H4g07556 | C2H4g05154 | LOC_Os04g35060 | Os04g0429800 | - | Detail |
| CX4g031764 | 4:18,134,308-18,134,517 | + | - | C2H4g06183 | - | Os04g0429900 | - | Detail |
| CX4g032788 | 4:18,138,279-18,141,156 | + | C1H4g15837 | C2H4g17424 | LOC_Os04g35080 | Os04g0430000 | - | Detail |
| CX4g034353 | 4:18,147,204-18,150,454 | - | C1H4g26649 | C2H4g16424 | LOC_Os04g35100 | Os04g0430200 | - | Detail |
| CX4g034315 | 4:18,152,498-18,152,701 | - | - | - | - | - | - | Detail |
| CX4g031775 | 4:18,154,311-18,160,126 | + | C1H4g18238 | C2H4g24538 | LOC_Os04g35114 | Os04g0430400 | - | Detail |
| CX4g035768 | 4:18,166,609-18,166,782 | - | - | - | - | - | - | Detail |
| CX4g034052 | 4:18,167,388-18,169,310 | + | C1H4g28825 | C2H4g27705 | LOC_Os04g35130 | Os04g0430600 | - | Detail |
| CX4g034081 | 4:18,176,613-18,178,738 | + | C1H4g07049 | C2H4g02140 | LOC_Os04g35140 | Os04g0430700 | - | Detail |
| CX4g032243 | 4:18,181,524-18,182,956 | - | C1H4g08689 | C2H4g06351 | LOC_Os04g36640 | Os04g0430800 | - | Detail |
| CX4g031614 | 4:18,185,979-18,189,108 | + | C1H4g16671 | C2H4g00228 | LOC_Os04g35160 | Os04g0430900 | - | Detail |
| CX4g035313 | 4:18,189,886-18,190,059 | - | - | - | - | - | - | Detail |
| CX4g031518 | 4:18,191,006-18,194,322 | + | C1H4g02411 | C2H4g04980 | LOC_Os04g35170 | Os04g0431000 | - | Detail |
| CX4g033664 | 4:18,195,048-18,196,941 | - | C1H4g23756 | C2H4g22899 | LOC_Os04g35180 | Os04g0431100 | - | Detail |
| CX4g032072 | 4:18,212,501-18,217,443 | + | C1H4g30671 | C2H4g16731 | LOC_Os04g35210 | Os04g0431700 | Bph6 | Detail |
| CX4g033773 | 4:18,228,727-18,231,028 | - | C1H4g13913 | C2H4g05691 | LOC_Os04g35220 | Os04g0431800 | - | Detail |
| CX4g034641 | 4:18,241,478-18,246,416 | + | C1H4g20735 | C2H4g00811 | LOC_Os04g35240 | Os04g0432000 | SAPK7, OsSAPK7 | Detail |